Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq197 107 1e-18
seq80 107 1e-18
seq1030 98.7 8e-16
>seq197
Length=620651
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| |||||| ||||| ||||| ||||| || | || | || |||
Sbjct 446952 ACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 447011
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
||||||||||| || || ||||| ||||| || || | || | ||||||||||||
Sbjct 447012 AACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGG 447071
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| ||| ||| | | || || | | ||| ||||| | || || |||||
Sbjct 447072 ATCTTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCGACCTCAAGAGTGATAGTTTTA 447131
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | ||| || || |||||||||||
Sbjct 447132 CCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || || ||||| || || ||| ||| ||||| || ||||| || || | | |||
Sbjct 446259 AGACGTAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGA 446318
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||| |||||||| || || || ||||| || || | ||||| ||||||
Sbjct 446319 CCATCCTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCC 446378
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| |||||| | | | || || || || || |||| ||
Sbjct 446379 TTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTG 446438
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||||| ||| || || |||||||||||
Sbjct 446439 ATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || || ||| |||||| || || ||||| ||||| || | ||
Sbjct 449347 AGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGG 449406
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||||||| || || ||||| |||| | ||| || || | ||||| |||||
Sbjct 449407 CCATCCTCCAACTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCT 449466
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| || ||||| |||| |||
Sbjct 449467 TTGTCTTGGATCTTGGCCTTCACATTCTCAATTGTGTCTGAGGCTTCCACTTCCAGGGTA 449526
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| ||||| || |||||||||||
Sbjct 449527 ATTGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 449564
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || || ||| ||| || ||||| ||||| || ||||| | ||
Sbjct 447887 AGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGG 447946
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||||| || || ||||| ||||| || || | ||| | ||||||
Sbjct 447947 CCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCC 448006
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| |||||| | | | || || || || || |||| ||
Sbjct 448007 TTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTG 448066
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||||| ||| || || |||||||||||
Sbjct 448067 ATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| || | ||| || || ||| || ||||| ||||| || || | | |||
Sbjct 447659 AGACGCAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGA 447718
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||| ||||| || || || || |||||||| || | || | |||||||
Sbjct 447719 CCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCC 447778
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| || || || |||| ||
Sbjct 447779 TTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTG 447838
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| |||| |||||| || |||||||||||
Sbjct 447839 ATGGTCTTTCCTGTCAGAGTTTTGACGAAAATCTGCAT 447876
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || || || | ||| || || ||| || || || ||||| ||||||| | ||
Sbjct 448115 AGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGG 448174
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | ||||||||| || || ||||| ||||| || |||| |||| ||| |||
Sbjct 448175 CCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCC 448234
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| |||||| | | | ||||| || || || |||| ||
Sbjct 448235 TTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCCAGGGTG 448294
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| ||||| || |||||||||||
Sbjct 448295 ATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || || || | ||| || || ||| || || || ||||| ||||||| | ||
Sbjct 446487 AGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGG 446546
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | ||||||||| || || ||||| ||||| || |||| |||| ||| |||
Sbjct 446547 CCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCC 446606
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| |||||| | | | ||||| || || || || | ||
Sbjct 446607 TTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCTAGGGTG 446666
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| ||||| || |||||||||||
Sbjct 446667 ATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || || |||||| || ||||| || ||||| | | ||
Sbjct 448872 AGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGG 448931
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | || |||||||| || || |||||||| || || | || | ||| |||
Sbjct 448932 CCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCC 448991
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| || ||||| |||| ||
Sbjct 448992 TTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACTTCCAGAGTG 449051
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | ||||| || |||||||||||
Sbjct 449052 ATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089
>seq80
Length=1087096
Score = 107 bits (118), Expect = 1e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 8998 GTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTAACCTCT 9057
|| || || || ||||| ||||| || | | ||||| || ||| | ||||||||
Sbjct 52065 GTTCCAGTGGATCCAAAGCCTCCTTCAGCTCTCTTGGTCTCTGTCAAGTTGGTAACCTCA 52124
Query 9058 ACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTC 9117
| || ||| || || || | ||||||||| | || ||||||||||| || || |||
Sbjct 52125 AGTAGGTCGGGGTAGAATATCTTTTCACAAATGAGCTGGGCAATCCTGTCTCCTTTCTTC 52184
Query 9118 ACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCC 9177
|| |||||| || || |||||||| || ||||||||||| || || | || ||
Sbjct 52185 ACTGGGAAGTCTTGATCAGAGTGATTGAAGAGGACCACTCCCACATTGCCACGATAGTCT 52244
Query 9178 TCATCGATCACACCAGC 9194
||||| |||||||||||
Sbjct 52245 TCATCTATCACACCAGC 52261
>seq1030
Length=27445
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || || |||| ||||||||| || || || || || || || ||||| || ||
Sbjct 2674 CCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 2733
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || |||| ||| ||||| || || ||||||||||| || |||| |||
Sbjct 2734 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGG 2793
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| ||||| ||| ||| | | | || || |||||||||
Sbjct 2794 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACC 2853
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || || || ||||| | || || || || ||||||||
Sbjct 2854 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCAT 2900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380929271037462
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