Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019405.1
Length=215710
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 136 5e-27
>seq1012
Length=28740
Score = 136 bits (150), Expect = 5e-27
Identities = 402/604 (67%), Gaps = 37/604 (6%)
Strand=Plus/Plus
Query 86001 CGCAGAGGTTCGACTGGCGGACCTTGAGGCCGAGCTT---CTTCTGCGCCTCGGGGAAGT 86057
|||| ||||||||||| |||||| ||||| || | || |||| | | | |
Sbjct 27667 CGCACAGGTTCGACTGTTTGACCTTCAGGCCCAGGTCACGCTGGTGCGGCGCC---ATCT 27723
Query 86058 GGCGGTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCATCCGCGTCTCGA 86117
||||||| |||||| |||| | ||||||||||| |||||||| || | ||||
Sbjct 27724 GGCGGTTCACCGTGTCGGAGAAGATCAGATAGGGCTCGCCGGTCTGCATGCGGATGTCGA 27783
Query 86118 TCAGCAGGCGCCACAGTTCGCGCGCCCGCTCGACGCGGATCA---CCTCGCCGGTCTTGG 86174
|||| | |||||| || ||| || |||||| ||| | |||||| |||||
Sbjct 27784 GCAGCTTGGTCCACAG--CGAGCGGGCG-TCGACGGTCTTCAAGACTTCGCCGTCCTTGG 27840
Query 86175 GCGAGCGCAGGGCGAACTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGT 86234
|||| |||| |||| | | | | |||||| ||||||||||||||||||||
Sbjct 27841 GCGATTTCAGGTCGAAGGTCGCGCCAACCTTCACCGCTTCCATGAACTCGTCGGTGACGT 27900
Query 86235 TGACGGCGTTGTGCAGGTTGGTGATCTTGCGGTTCTGGTCGCCGCCAGTAGGCTTGCGGG 86294
||| | ||| |||||||| | ||||||||| | | |||| | ||| ||||||
Sbjct 27901 TGATGCCGTGATGCAGGTTCAGGGACTTGCGGTT---GAAGTCGCCCGAAGGTTTGCGGA 27957
Query 86295 CCGTGATGAACTCGCGGATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCC 86354
| | ||||| ||| |||||||| |||||| || || || ||| || || |
Sbjct 27958 TCTCAAGAAACTCCTCGATCTCCGGGTGATGGATGTCGAGGTACACAGCGGCCGAACCAC 28017
Query 86355 GGCGCGTGCCGCCTTGGCTGACGGCGAGAATCAGGCGATCGTCCACCGC---CATGAACG 86411
||||| |||||| | || || ||| | || ||||| | | ||||| |
Sbjct 28018 GGCGCAGCGAGCCTTGCGAAATCGCCAGGGTCA-GTGA--GTCCATCACGCGGATGAAGG 28074
Query 86412 GGATCACGCC---GGTC--GACTGCGAACCCTTCGAGGTCTTCTCGCCCAGGCCGCGCAG 86466
|||| | ||| |||| | | ||| |||||| ||| ||||| | | ||| |
Sbjct 28075 GGATGATGCCCGAGGTCTTGCCCGCG--CCCTTC---ACCTTTTCGCCGATGGAGCGGAC 28129
Query 86467 GGCGCCGTAATAGGAGCCGATGCCGCCGCCCATCGACGAGAGCCAGATGACCTCGT--CA 86524
| |||| | |||| ||||||||||||||| | |||| ||| | | | |||| ||
Sbjct 28130 GCCGCCCCAGTAGGTGCCGATGCCGCCGCCGTTGGACGCCAGCGATACGTTTTCGTTCCA 28189
Query 86525 TA-GTGCTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGG 86583
| || || ||| || || | ||||| || ||| | |||||||||||||||||
Sbjct 28190 GACGTTCT-GGATGCCG--TCCAGACTGTCGCTGACGGCGTTCAGGAAGCAGGAGATCGG 28246
Query 86584 CAGG 86587
||||
Sbjct 28247 CAGG 28250
Score = 131 bits (144), Expect = 2e-25
Identities = 125/159 (79%), Gaps = 6/159 (4%)
Strand=Plus/Plus
Query 84445 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAG 84504
|| |||||||| |||||| ||| | | | ||| || |||||||||||||||||||| |
Sbjct 26985 GATGTGCTGGACCGAACCTTCGTGCTCCAGGATCGAGTTCCAGACCGCCTCGGTGTTGAT 27044
Query 84505 GCCCAGTTCACC---CAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGA 84561
|||| || | |||||| || ||| || |||||||||| ||||||||||| ||
Sbjct 27045 GCCCTTCTCGTCTAGCAGGCG---CTCCAGATAGGGGTTCTTGACCGCGAACGAGCCGGA 27101
Query 84562 CAGGGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTC 84600
||||||||||||| || |||||||||||||||||||
Sbjct 27102 CAGGGTCTTGTGCGTATAGATGTTGGCCGGGATCGGCTC 27140
Score = 125 bits (138), Expect = 1e-23
Identities = 202/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 84797 CTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGCCC 84856
|| ||||| | || | || | ||| || | ||||||||||| | ||||||||| |||
Sbjct 27384 CTTTCGAAGGCGACGCCCTGACCCTGCAGGAAGGAGTGGAAGCCCATCAGGCCCAGACCC 27443
Query 84857 ACCGACCGTTCGCGCACGGCGCTGTAGGCGGC-GCGGTGCATCTCGTCCGGCGCGTTGTC 84915
||||| ||||||||| ||| ||| | || || | ||| |||| |||||| |
Sbjct 27444 ACCGAACGTTCGCGCTTGGCCGAATAGACAGCTGCCGA-CATGGCGTCGGGCGCGCGCTG 27502
Query 84916 GATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCGGGTG 84975
|||||| ||| || |||||||| | |||| |||||| ||||||||| || |
Sbjct 27503 GATGAAGTCCTCCAGCACATTGTCCAGGAACCGCATCAGGTCCTCGATGAAGCGGGGCTC 27562
Query 84976 ATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGGTCCG 85035
|| ||||||||| | | ||||||| |||||| || ||||||||||||||||| ||
Sbjct 27563 CTCGCGCCACTCCAGGAAGGTCTCGGCATTGACGGACGACAGGCAGCAGACGGCGGTGCG 27622
Query 85036 CATCTTGCCGAAGATGTCGCGGCCCGAGCCCAGCATGATCTCCGAGCA 85083
| ||| | | ||| ||| | | ||||||||| || | |||
Sbjct 27623 GTCCACGCCCAGGTGGTCCTTGCCGGTGTGCAGCATGATTTCGGCGCA 27670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 690128523520800
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