Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq1012 123 4e-23 >seq1012 Length=28740 Score = 123 bits (136), Expect = 4e-23 Identities = 188/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 113838 CTGAAGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGCCGA 113897 ||| || ||| ||||||||||| ||||||||| || |||||||| || || | ||||| Sbjct 27407 CTGCAGGAAGGAGTGGAAGCCCATCAGGCCCAGACCCACCGAACGTTCGCGCTTGGCCGA 27466 Query 113898 GTAGATCGCGTAGGCCAACGC--CGGCGGAGCGTTGTCGATGAACACCTGGAGGCAGTTG 113955 |||| || | || || ||| | ||| || |||||| ||| || ||| Sbjct 27467 ATAGACAGCTGCCGACATGGCGTCGGGCGCGCGCTG--GATGAAGTCCTCCAGCACATTG 27524 Query 113956 TCCAGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACTTC 114015 ||||| | ||||||||||| ||||||||| | || || ||| |||||| ||| || Sbjct 27525 TCCAGGAACCGCATCAGGTCCTCGATGAAGCGGGGCTCCTCGCGCCACTCCAGGAAGGTC 27584 Query 114016 TCGGCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGCGC 114075 ||||| |||||| ||||||||||||||| || || || | | ||| | | || Sbjct 27585 TCGGCATTGACGGACGACAGGCAGCAGACGGCGGTGCGGTCCACGCCCAGGTGGTCCTTG 27644 Query 114076 CCGGTCGCCAGCGTGATCTCGGTGCA 114101 ||||| |||| |||| |||| ||| Sbjct 27645 CCGGTGTGCAGCATGATTTCGGCGCA 27670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895746312438480