Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 131 2e-25
>seq1012
Length=28740
Score = 131 bits (144), Expect = 2e-25
Identities = 397/599 (66%), Gaps = 27/599 (5%)
Strand=Plus/Plus
Query 86106 CGCAGAGGTTCGACTGGCGAACGCTCAGGCCAAGCTTCTTCTGCCGGTCCGGGAAGTGGC 86165
|||| ||||||||||| || ||||||| || | ||| | || | ||||
Sbjct 27667 CGCACAGGTTCGACTGTTTGACCTTCAGGCCCAGGTCACGCTGGTGCGGCGCCATCTGGC 27726
Query 86166 GGTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATCA 86225
|||| |||||| |||| | ||||||||||| ||||||| ||| | |||| ||
Sbjct 27727 GGTTCACCGTGTCGGAGAAGATCAGATAGGGCTCGCCGGTCTGCATGCGGATGTCGAGCA 27786
Query 86226 GCAGGCGCCACAGGTCGCGCGCCCGTTCCATGCGGATCA---CCTCGCCCGTCTTGGGCG 86282
|| | |||||| || ||| ||| | | | ||| | ||||| ||||||||
Sbjct 27787 GCTTGGTCCACAG--CGAGCGGGCGT-CGACGGTCTTCAAGACTTCGCCGTCCTTGGGCG 27843
Query 86283 AGCGCAGGGCGAAGTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGTTGA 86342
| |||| ||||| | | | | |||||| |||||||||||||||||||||||
Sbjct 27844 ATTTCAGGTCGAAGGTCGCGCCAACCTTCACCGCTTCCATGAACTCGTCGGTGACGTTGA 27903
Query 86343 CCGCATTGTGCAGGTTGGTGATCTTGCGGTTGTGGTCCCCGCCCGTCGGCTTGCGCGCGG 86402
| | |||||||| | |||||||||| || |||||| || ||||| |
Sbjct 27904 TGCCGTGATGCAGGTTCAGGGACTTGCGGTTGAAGT---CGCCCGAAGGTTTGCG-GATC 27959
Query 86403 TGATG-AACTCGCGGATTTCGGGGTGGTGGATGTCCAGGTAGACGGCGTTGGAGCCCCGG 86461
| | | ||||| ||| || ||||| |||||||| ||||| || ||| || || |||
Sbjct 27960 TCAAGAAACTCCTCGATCTCCGGGTGATGGATGTCGAGGTACACAGCGGCCGAACCACGG 28019
Query 86462 CGCGTACCGCCCTGGCTGACGGCCAGGATCAGGCGGTCGTCCACCGCCATGAACGGGATG 86521
||| ||| || | |||||| |||| ||| ||| ||||| ||||||
Sbjct 28020 CGCAGCGAGCCTTGCGAAATCGCCAGGGTCAGTGAGTCCATCACGCGGATGAAGGGGATG 28079
Query 86522 ACGCC---GGTC--GACTGCGAACCCTTGGAGGTCTTCTCGCCCAGGCCGCGCAGGGCGC 86576
| ||| |||| | | ||| ||||| ||| ||||| | | ||| | | |||
Sbjct 28080 ATGCCCGAGGTCTTGCCCGCG--CCCTT---CACCTTTTCGCCGATGGAGCGGACGCCGC 28134
Query 86577 CGTAATAGGAGCCGATGCCGCCGCCCATCGACGACAGCCAGATGACCTCGT--CATA-GT 86633
| | |||| ||||||||||||||| | |||| |||| | | | |||| || | ||
Sbjct 28135 CCCAGTAGGTGCCGATGCCGCCGCCGTTGGACGCCAGCGATACGTTTTCGTTCCAGACGT 28194
Query 86634 GCTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGG 86692
|| ||| || || | ||||| || ||| | |||||||||||||||||||||
Sbjct 28195 TCT-GGATGCCG--TCCAGACTGTCGCTGACGGCGTTCAGGAAGCAGGAGATCGGCAGG 28250
Score = 118 bits (130), Expect = 2e-21
Identities = 239/350 (68%), Gaps = 10/350 (3%)
Strand=Plus/Plus
Query 84838 GTCGGCCTTGCGGCGCATGTGGCGGAAGATGGTCTTATTGAGCGTCTCGGCCGCCATGCT 84897
|||||||| |||||||| || ||| | | | | || || || |||| |||
Sbjct 27326 GTCGGCCTCGCGGCGCAGATGCTTGAACAGGCGCATGTTCCACGACTTGGCCATGGCGCT 27385
Query 84898 CTCGAACGGGATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCAC 84957
||||| | || | | | ||| || | ||||||||||||| ||||||||| |||||
Sbjct 27386 TTCGAAGGCGACGCCCTGACCCTGCAGGAAGGAGTGGAAGCCCATCAGGCCCAGACCCAC 27445
Query 84958 CGAGCGCTCGCGCACGGCGCTGTAGGAGGC--CCGGTGCATCTCGTCCGGCGCGTTGTCG 85015
||| || |||||| ||| ||| || ||| ||| |||| |||||| | |
Sbjct 27446 CGAACGTTCGCGCTTGGCCGAATAGACAGCTGCCG--ACATGGCGTCGGGCGCGCGCTGG 27503
Query 85016 ATGAACACCTGGAGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGA 85075
||||| ||| || |||||||| | ||||||||||| ||||||||| |||| |
Sbjct 27504 ATGAAGTCCTCCAGCACATTGTCCAGGAACCGCATCAGGTCCTCGATGAAG--CGGG-GC 27560
Query 85076 TCCT---TCCATTCGACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGGCCGTG 85132
|||| ||| || | | | ||||| |||||| |||||||||||||||||| |||
Sbjct 27561 TCCTCGCGCCACTCCAGGAAGGTCTCGGCATTGACGGACGACAGGCAGCAGACGGCGGTG 27620
Query 85133 CGCATCTTGCCGAACACGTCGCGGCCGGTGCCCAGCATGATCTCCGAGCA 85182
|| | ||| | ||| ||||||| ||||||||| || | |||
Sbjct 27621 CGGTCCACGCCCAGGTGGTCCTTGCCGGTGTGCAGCATGATTTCGGCGCA 27670
Score = 93.3 bits (102), Expect = 6e-14
Identities = 220/338 (65%), Gaps = 41/338 (12%)
Strand=Plus/Plus
Query 84363 TGGCGTCGTGCGGGTGGAAGACGTTCAGGGACTGGCCCTGGCAGATGTCCTCCGTCCGCC 84422
|| ||||| ||| ||| | |||||| |||||| |||||||||| ||| || ||
Sbjct 26843 TGACGTCGCCGGGGATGAACAGGTTCAGCGACTGGGCCTGGCAGATTTCCGGCGCGCGGT 26902
Query 84423 CGACGGCCAGCCGCACGACCCAGCGCTGGTCGAGTTCCATCGCCGTCTTGTAGACGCGCT 84482
|| ||||||| || |||||||||||||| ||||| | || |||||| | |||| ||
Sbjct 26903 CGGCGGCCAGTTCGACCACCCAGCGCTGGTCCAGTTCGAAGGCGGTCTTGAACACGCCCT 26962
Query 84483 TCTTGTGGTCCAGGACCGCCGGGTCGACTTCGATGCCCAGGGCCTCGAAGAACTCGACCG 84542
|| ||| ||||| | |||| | ||
Sbjct 26963 TC---------------------TCGTCTTCGTT---CAGGTCGTC-------------- 26984
Query 84543 AGAAGTGCTGGATCGAGCCCTCGTTGGCGACGATGGTCTTCCAGACCTCATCGGTGTCGG 84602
|| |||||||| ||| || |||| | | ||| | ||||||||| | ||||||| |
Sbjct 26985 -GATGTGCTGGACCGAACCTTCGTGCTCCAGGATCGAGTTCCAGACCGCCTCGGTGTTGA 27043
Query 84603 CGCCCAGGCTCGCCAGCCACGCGC-GCAGCCAGCGGTTCTTGACCTGGAACGAACCCGAG 84661
|||| |||| | || |||| ||| || ||||||||||| |||||| || ||
Sbjct 27044 TGCCC-TTCTCGTCTAGCAGGCGCTCCAGATAGGGGTTCTTGACCGCGAACGAGCCGGAC 27102
Query 84662 AGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGGGCTC 84699
|||||||||||| || ||||||| || | |||||
Sbjct 27103 AGGGTCTTGTGCGTATAGATGTTGGCCGGGATCGGCTC 27140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715759948723200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |