Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019410.1
Length=221828
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 131 2e-25
>seq1012
Length=28740
Score = 131 bits (144), Expect = 2e-25
Identities = 125/159 (79%), Gaps = 6/159 (4%)
Strand=Plus/Plus
Query 84571 GAAGTGCTGGATCGAGCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 84630
|| |||||||| ||| || ||| | | | |||||| ||||||||||||||||||| |
Sbjct 26985 GATGTGCTGGACCGAACCTTCGTGCTCCAGGATCGAGTTCCAGACCGCCTCGGTGTTGAT 27044
Query 84631 GCCCAGTTCGCC---CAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGA 84687
|||| ||| | |||||| || ||| || |||||||||| ||||||||||| ||
Sbjct 27045 GCCCTTCTCGTCTAGCAGGCG---CTCCAGATAGGGGTTCTTGACCGCGAACGAGCCGGA 27101
Query 84688 CAGGGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTC 84726
||||||||||||| || |||||||||||||||||||
Sbjct 27102 CAGGGTCTTGTGCGTATAGATGTTGGCCGGGATCGGCTC 27140
Score = 127 bits (140), Expect = 3e-24
Identities = 400/604 (66%), Gaps = 37/604 (6%)
Strand=Plus/Plus
Query 86127 CGCAGAGGTTCGACTGGCGGACCTTGAGGCCGAGCTT---CTTCTGCGCCTCGGGGAAGT 86183
|||| ||||||||||| |||||| ||||| || | || |||| | | | |
Sbjct 27667 CGCACAGGTTCGACTGTTTGACCTTCAGGCCCAGGTCACGCTGGTGCGGCGCC---ATCT 27723
Query 86184 GGCGGTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCATCCGCGTCTCGA 86243
||||||| |||||| |||| | ||||||||||| |||||||| || | ||||
Sbjct 27724 GGCGGTTCACCGTGTCGGAGAAGATCAGATAGGGCTCGCCGGTCTGCATGCGGATGTCGA 27783
Query 86244 TCAGCAGGCGCCACAGTTCGCGCGCCCGCTCGACGCGGATCA---CCTCGCCGGTCTTGG 86300
|||| | |||||| || ||| || |||||| ||| | |||||| |||||
Sbjct 27784 GCAGCTTGGTCCACAG--CGAGCGGGCG-TCGACGGTCTTCAAGACTTCGCCGTCCTTGG 27840
Query 86301 GCGAACGCAGGGCGAACTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGT 86360
|||| |||| |||| | | | | |||||| ||||||||||||||||||||
Sbjct 27841 GCGATTTCAGGTCGAAGGTCGCGCCAACCTTCACCGCTTCCATGAACTCGTCGGTGACGT 27900
Query 86361 TGACGGCGTTGTGCAGATTGGTGATCTTGCGGTTCTGGTCGCCGCCGGTCGGCTTGCGGG 86420
||| | ||| ||||| || | ||||||||| | | |||| | || ||||||
Sbjct 27901 TGATGCCGTGATGCAGGTTCAGGGACTTGCGGTT---GAAGTCGCCCGAAGGTTTGCGGA 27957
Query 86421 CCGTGATGAACTCGCGGATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCC 86480
| | ||||| ||| |||||||| |||||| || || || ||| || || |
Sbjct 27958 TCTCAAGAAACTCCTCGATCTCCGGGTGATGGATGTCGAGGTACACAGCGGCCGAACCAC 28017
Query 86481 GGCGCGTGCCGCCTTGGCTGACGGCGAGAATCAGGCGATCGTCCACCGC---CATGAACG 86537
||||| |||||| | || || ||| | || ||||| | | ||||| |
Sbjct 28018 GGCGCAGCGAGCCTTGCGAAATCGCCAGGGTCA-GTGA--GTCCATCACGCGGATGAAGG 28074
Query 86538 GGATCACGCC---GGTC--GACTGCGAACCCTTCGAGGTCTTCTCGCCCAGGCCGCGCAG 86592
|||| | ||| |||| | | ||| |||||| ||| ||||| | | ||| |
Sbjct 28075 GGATGATGCCCGAGGTCTTGCCCGCG--CCCTTC---ACCTTTTCGCCGATGGAGCGGAC 28129
Query 86593 GGCGCCGTAGTAGGAGCCGATGCCGCCGCCCATCGACGAGAGCCAGATAACCTCGT--CA 86650
| |||| |||||| ||||||||||||||| | |||| ||| | | |||| ||
Sbjct 28130 GCCGCCCCAGTAGGTGCCGATGCCGCCGCCGTTGGACGCCAGCGATACGTTTTCGTTCCA 28189
Query 86651 TA-GTGCTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGG 86709
| || || ||| || || | ||||| || ||| | |||||||||||||||||
Sbjct 28190 GACGTTCT-GGATGCCG--TCCAGACTGTCGCTGACGGCGTTCAGGAAGCAGGAGATCGG 28246
Query 86710 CAGG 86713
||||
Sbjct 28247 CAGG 28250
Score = 125 bits (138), Expect = 1e-23
Identities = 202/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 84923 CTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGCCC 84982
|| ||||| | || | || | ||| || | ||||||||||| | ||||||||| |||
Sbjct 27384 CTTTCGAAGGCGACGCCCTGACCCTGCAGGAAGGAGTGGAAGCCCATCAGGCCCAGACCC 27443
Query 84983 ACCGACCGTTCGCGCACGGCGCTGTAGGCGGC-GCGGTGCATCTCGTCCGGCGCGTTGTC 85041
||||| ||||||||| ||| ||| | || || | ||| |||| |||||| |
Sbjct 27444 ACCGAACGTTCGCGCTTGGCCGAATAGACAGCTGCCGA-CATGGCGTCGGGCGCGCGCTG 27502
Query 85042 GATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCGGGTG 85101
|||||| ||| || |||||||| | |||| |||||| ||||||||| || |
Sbjct 27503 GATGAAGTCCTCCAGCACATTGTCCAGGAACCGCATCAGGTCCTCGATGAAGCGGGGCTC 27562
Query 85102 ATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGGTCCG 85161
|| ||||||||| | | ||||||| |||||| || ||||||||||||||||| ||
Sbjct 27563 CTCGCGCCACTCCAGGAAGGTCTCGGCATTGACGGACGACAGGCAGCAGACGGCGGTGCG 27622
Query 85162 CATCTTGCCGAAGATGTCGCGGCCCGAGCCCAGCATGATCTCCGAGCA 85209
| ||| | | ||| ||| | | ||||||||| || | |||
Sbjct 27623 GTCCACGCCCAGGTGGTCCTTGCCGGTGTGCAGCATGATTTCGGCGCA 27670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 709705684493120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |