Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019488.1
Length=34117
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 376 5e-100
>seq1001
Length=29257
Score = 376 bits (416), Expect = 5e-100
Identities = 917/1372 (67%), Gaps = 77/1372 (6%)
Strand=Plus/Plus
Query 27137 GAAATCAACGAGGGCACCCGACCTATTACCACGGTGAGCACTGCCATCGTGGGCATGGTC 27196
|| || ||||| ||||| || | ||| |||| || || |||||| | |||||||||
Sbjct 6731 GAGATTAACGATGGCACGCGCACCATTTCCACCGTTTCGACGGCCATCATCGGCATGGTC 6790
Query 27197 TGCACCGGCGATGATGCTGATGCGTCCGTGTTCCCCCTCAATAAGCCGGTCCTGCTGACT 27256
||||| | | |||||||| || |||||| | || ||||||| ||| | |
Sbjct 6791 TGCACGGCCAGCGATGCTGACGCAAAGACATTCCCCTTAAACGAGCCGGTACTGATTAAC 6850
Query 27257 GATGTGCTCACCGCCAGCGGTAAAGCGGGGGAGTCCGGCACGCTGGCCCGCTCGCTGGAC 27316
|||| || || | ||||||||| || | ||||||||||| || ||| |
Sbjct 6851 AGCGTGCAAACGGCTATCGGTAAAGCCGGTAAAAAAGGCACGCTGGCAAAATCCCTGCAG 6910
Query 27317 GCGATTGCAGATCAGGCAAAACCCGTGACTGTCGTTGTGCGTGTGGCGCAGGGCG----- 27371
|| || || || ||| ||||| || | ||| || ||||| || | | || |
Sbjct 6911 GCCATCGCCGACCAGTGCAAACCGGTCATTGTGGTGGTGCGCGTTCCAGAAGGTGTCGAC 6970
Query 27372 --------AAACC--GAAGCGG---------AAACCACCTCCAATATTATCGGCGGCGTA 27412
| ||| ||||||| |||||| ||||| || ||||||
Sbjct 6971 GACCCGGCAGACCCGGAAGCGGCGCAGAAAGAAACCATTTCCAACATCATCGGC------ 7024
Query 27413 ACTTCCGACGGTAA--GAAAA-----CGGGCATGAAAGCGCTACTGTCGGCGCA----GT 27461
|| |||||| || | ||| ||||| |||||||||| | ||||| | ||
Sbjct 7025 ACGACCGACGAAAACGGCAAATACACCGGGC-TGAAAGCGCTGTTAACGGCGAAAACCGT 7083
Query 27462 CGCAGCTCGGTGTCAAGCCGTGCATTCTTGGGGTGCCGGGACATGACACTCAGGCCGTTG 27521
| | ||| || |||||| ||||||| || |||||||| | || || |||| || |
Sbjct 7084 CAC----CGGCGTTAAGCCGCGCATTCTCGGCGTGCCGGGGCTGGATACGCAGGAAGTGG 7139
Query 27522 CTACTGAACT-GC-TGGGCGTGGCGCAAAGCTTGCGCGGGTTTGCCTACCTTGCTGCTAA 27579
| || | || || | | || | | ||| |||||| ||| | |||| | ||
Sbjct 7140 CGACCGCGCTTGCGTCAACCTGCC--AGAGCCTGCGCGCGTTCGGCTACGTAAGCGCGTG 7197
Query 27580 TGGCTGCAAAACGGTGGAGGAAGCTATTGCCTATCGCGAGAATTTCAGTCAGCGCGAGGG 27639
|||||||| || | || || || || || ||||||||||| |||||||||
Sbjct 7198 GGGCTGCAAGACCATTTCCGACGCCATCAAATACCGTGAGAATTTCAGCCAGCGCGAGCT 7257
Query 27640 AATGCTGATCTGGCCTGACTTCATCAACTTTGACACCGTGCTGAAAGCAGACGCGACGGC 27699
||| | || |||||||| | | |||||| | ||| | | || | ||
Sbjct 7258 GATGGTCATTCACCCTGACTTTCTGGCATGGGACACCACGGCGAACGAAACCGATATTGC 7317
Query 27700 TTACGCCTCCGCCCGTGCGCTCGGCCTGCGTGCCAAAATCGACGAGCAGATCGGCTGGCA 27759
| || ||||||| |||||||||||||| |||||||||||| || ||| ||| |||||
Sbjct 7318 ATGGGCGACCGCCCGCGCGCTCGGCCTGCGCGCCAAAATCGACCAGGAGACCGGATGGCA 7377
Query 27760 TAAAACCCTGTCCAATGTGGGTGTGAACGGTGTCACCGGCATTTCCGCTGATGTGTTCTG 27819
||||| ||||| || || || ||||| || ||||||||| | ||| || | ||
Sbjct 7378 CAAAACGCTGTCTAACGTTGGCGTGAATGGCGTCACCGGCGTCAGCGCCTCGGTCTCATG 7437
Query 27820 GGATCTGCAGGACCCGGCAACCGATGCGGGACTGCTGAACAAAAATGACGTCACCACATT 27879
|||| ||||||| | ||| ||||| || |||||||| | | || || || |
Sbjct 7438 GGATTTGCAGGAGCAGGCTACCGACGCCAACCTGCTGAATCAGGCCGGGGTGACAACGCT 7497
Query 27880 GATCCGCAAAGACGGCTTCCGCTTCTGGGGTTCCCGT---TGTCTCAGTGACGATCCGCT 27936
|||||||| |||||||| |||||||| |||| || ||| |||||||| |
Sbjct 7498 AATCCGCAACGACGGCTTTAAGTTCTGGGGCAACCGTACCTG-CTC--GGACGATCCTTT 7554
Query 27937 GTTTGCTTTTGAGAACTACACCCGTACGGCGCAGGTGCTGGCTGACACTATGGCGGAGGC 27996
|| | ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct 7555 ATTCGTGTTTGAAAACTACACCCGCACGGCGCAGGTGCTGGCCGACACGATGGCGGAGGC 7614
Query 27997 GCACATGTGGGCGGTGGA-TGGCGTGCTTAATCCG--TCGCTGGCCCGCGACATTATTGA 28053
|||| ||||||| |||| || | | |||| |||| |||||||||| | |
Sbjct 7615 GCACGCGTGGGCGATGGACAAGCCCGTT---TCCGCAACGCTTATCCGCGACATTGTCGC 7671
Query 28054 AGGACTACGCGCCAAGATGCGCAGTCTGGTCAACCAGGGATACCTGATTGGTGGTGACTG 28113
|| | ||||| | ||| ||| || | || || | ||| || ||
Sbjct 7672 CGGTATCAATGCCAAATTCCGCGAGCTGAAAAATAACGGCTATATCGTTGACGGGTCATG 7731
Query 28114 CTGGCTGGA---TGAGTCTGTTAACGATAAAGACGCCCTTAAAGCCGGGAAACTGACCAT 28170
|||| || ||||| ||| || |||| ||||||||||| ||| ||
Sbjct 7732 CTGGTACGACCCGGAGTC---AAACACCGTGGAAACCCTGAAAGCCGGGAAGCTGTATAT 7788
Query 28171 CGATTATGACTACACGCCGGTGCCTCCGCTTGAAAACCTGATGCTGCGCCAGCGCATCAC 28230
|||||| |||||||| || || || ||||| |||||||||| |||||||||||||||||
Sbjct 7789 CGATTACGACTACACCCCCGTCCCGCCGCTGGAAAACCTGACCCTGCGCCAGCGCATCAC 7848
Query 28231 CGATCGTTACCTGGTCGA-TTTTGCCAGCCGTGTC-GCTGCATAAGGGG----GAATCAT 28284
|||| || |||| || | | || || ||| | || ||||| | ||| |||
Sbjct 7849 CGATACCTATCTGGCTGACCTGTCAGAGTCG-GTCAACAGC-TAAGGAGCTCAGAA-CAT 7905
Query 28285 GGCTTTACCACGCAAGTTAAAACACCTGAACCTGTTCAACGACGGGAACAACTGGCAGGG 28344
||| ||||||||||| | ||| ||||||| |||| |||||||| || || |||
Sbjct 7906 GGCGTTACCACGCAAACTGAAATACCTGAATATGTTTAACGACGGCCTCAGCTACATGGG 7965
Query 28345 GATCGTTGAGTCTCTGACCCTGCCGAAATTTACCCGCAAGTTTGAGAAGTATCGCGGCGG 28404
||||||| || | |||||||| || | ||||||||| ||||||| || ||||||||
Sbjct 7966 CGTCGTTGAATCCGTCACCCTGCCAAAGCTGACCCGCAAGCTTGAGAAATACCGCGGCGG 8025
Query 28405 CGGTATGCCGGGCGCAGTGGATGTGGACATGGGGCTGGATGACGGTGCACTG 28456
||| ||||||||| | ||| | ||| | || || || |||| || |||
Sbjct 8026 CGGGATGCCGGGCTCGGTGTCGATTGACCTCGGTCTCGACGACGACGCGCTG 8077
Score = 183 bits (202), Expect = 7e-42
Identities = 448/674 (66%), Gaps = 10/674 (1%)
Strand=Plus/Plus
Query 22639 CTTTATCCGGGGCCGGAAGCGGAGCCTGTTATGGCGGCGGCAAAAGCCAGCCTGCAGAAG 22698
||||| || || || ||| |||||||| | || || ||||| | |||||| |
Sbjct 3381 CTTTACCCCGGTCCCGAAAGCGAGCCTGTGCTCAGTGCTGCGAAAGCAAAGCTGCAGGCG 3440
Query 22699 TACATCGCCAGTCAGACGAGGCTGGGACGTGATATCCGCCGCAGCGCCATTTATGCCGCG 22758
|| ||| || ||| |||| || || ||||||||| |||||||||||||||
Sbjct 3441 TATATCACCGCGCAGCACCGGCTCGGGCGCGATATCCGCAAATCGGCCATTTATGCCGCG 3500
Query 22759 CTGCACGTGGAGGGCGTCCAGCGTGTGGAGCTAACGTCCCCTCTGGAGGATGTGGTGCTG 22818
|| || || |||||||| ||||| || ||||| | || ||| || | || ||
Sbjct 3501 CTCCATGTTGAGGGCGTGCAGCGCGTCGAGCTGGCCGAACCGGTGGCCGACATCGTTCTC 3560
Query 22819 GATAAGACGCAGGCGGCATCCTGTACTGAATGGAGCGTTACCAACGGGGGCACGGATGAA 22878
||| | || || ||| ||| || | || | ||| |||| ||||||| ||||||
Sbjct 3561 GATGACACACAAGCGTCATGGTGCAGCGACTACGCCGTCACCATAGGGGGCAACGATGAA 3620
Query 22879 TAGT------CTGTTGCCGCCGGGTTCGTCGCCGCTTGAGC-GCCGACTGGCGCAGACCT 22931
| | ||| ||||| ||| ||||| ||||||||| | || | ||||| |||
Sbjct 3621 TGATACCCGCCTGCTGCCGGTGGGCTCGTCACCGCTTGAGGTGGCGGC-GGCGCGCGCCT 3679
Query 22932 GCAGCGGGATTTCCGATCTGCAGGTATCGCTGCGTGATTTGTGGAACCCGGCAACCTGCC 22991
|| | |||| || | || |||||||| | | |||| || | |||||
Sbjct 3680 GCGCTGAGATTGAAAATACCCCCGTTCCGCTGCGTCGTCTCTGGAGTCCTGACGACTGCC 3739
Query 22992 CGATCAGAT-TCCTGCCTTATCTGGCCTGGGCGTTTTCTGTTGACCGCTGGGATGAGAGC 23050
|| || || | ||||| | ||||| ||||||||||| |||||||||||||| |||| |
Sbjct 3740 CGG-CAAATCTGCTGCCGTGGCTGGCGTGGGCGTTTTCCGTTGACCGCTGGGACGAGAAC 3798
Query 23051 TGGACAGAAAGCGTCAAGCGCCGCGTTGTGCAGGACGCTTTTTATATCCATCAGCACAAG 23110
||| | || | ||||| || | | | || | | ||||||| ||||||
Sbjct 3799 TGGCCGGAGGCCACAAAGCGGGATGTGATCCGCGCGGCGTGGTTTATCCATGCGCACAAA 3858
Query 23111 GGGACAACCCGCGCCGTGCGGCGCGTGGTGGAGCCGTTCGGCTTCCTGATCCGCATCATT 23170
|| || | | || ||||| |||||||||||||| |||||| |||||| | |
Sbjct 3859 GGAACGATTGGGGCAGTGCGCCGCGTGGTGGAGCCCCTCGGCTACCTGATTAACGTGTCG 3918
Query 23171 GAGTGGTGGCAGACCGGCGAAACGCCGGGAACGTTCCGTCTGGATATTGGCGTACAGGAT 23230
||||||||| | ||| ||| | || || ||||| || || ||||| || || ||
Sbjct 3919 GAGTGGTGGGAAACCAACGACCCACCCGGCACGTTTCGCCTCGATATCGGTGTGTTAGAG 3978
Query 23231 CATGGTATCACCGAAGACACCTATCTGGAGCTTGAGCGCCTGATAAGCGATGCCAAACCA 23290
|| |||||||| || | ||| ||| | ||||| || || |||||| || |||
Sbjct 3979 ACCGGCATCACCGAGGAAATGTATTACGAGATGGAGCGGCTCATTGCCGATGCAAAGCCA 4038
Query 23291 TGCAGCCGTCATCT 23304
||| || |||||
Sbjct 4039 GCCAGTCGCCATCT 4052
Score = 86.0 bits (94), Expect = 1e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 21741 CGACGGGAATACGGTTCGCTGCTGTCCGCGCTGATTGACCAGCCGCAGAACCCGGCACTG 21800
|| || |||||||| ||||| ||||| | |||||||||||||||||| |||||| |||
Sbjct 2450 CGTCGCGAATACGGCTCGCTTCTGTCGCAGATGATTGACCAGCCGCAGACCCCGGCCCTG 2509
Query 21801 CGCCTGCAGATTATG 21815
|||| ||||||||||
Sbjct 2510 CGCCGGCAGATTATG 2524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109050476766412
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