Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq486 150 3e-31
seq65 138 2e-27
seq216 84.2 4e-11
>seq486
Length=217039
Score = 150 bits (166), Expect = 3e-31
Identities = 380/570 (67%), Gaps = 11/570 (2%)
Strand=Plus/Plus
Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGA-CTCTCTGCATGAACAGGTCCGGGAC 213838
|| ||||| |||||||| ||| ||| | ||| | | |||| |||||| || || | ||
Sbjct 175959 GGGCACATAAGGCTCCACTCCTCGTTGT-TCTCAACCCTCTTCATGAATAGATCTGAGAT 176017
Query 213839 CCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898
|||||| || |||||| || | | | | || || || | ||| || ||
Sbjct 176018 CCACAGAGCATAGAACAGCTCTCGCGCGCGCACTTCCTCTTTGCCCGTGTTCTTCTTCAA 176077
Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958
||||| || || || ||||| |||||||||||||| | ||||| ||| |||||||| ||
Sbjct 176078 GTCTAGGAACTCGAATATGTCAGCGTGCCACGGCTCGAGGTAGACGGCGAAGGCGCCGGG 176137
Query 213959 CC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGG 214015
|| | ||||||||||||||||| | ||| ||||| | | |||||| | |||
Sbjct 176138 CCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATGGG 176197
Query 214016 TACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG-- 214073
|||||||||||||| ||||| || ||||| || || | ||| || || | |
Sbjct 176198 CACCAGCCCGTTGGAGACGCCGTTCGTGCCCGCGATGTAGGTGCCTTTCGCTCTGATGCA 176257
Query 214074 TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACA 214133
|| |||| | |||||||| || ||| | ||||| || | || || || ||| |
Sbjct 176258 ATGAACATG--AACTCCTATGCCGCCCGCGGATTTGGATATTAATGCACACTGCTTCAGA 176315
Query 214134 GTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGC 214193
|| || ||| || | |||||||| || | | | | | ||| || ||||||
Sbjct 176316 GTGTCGTAGATACCTTCGATGCTGTCGTCCTTCATGGCGATGAGGAAACATGAGGAGAGC 176375
Query 214194 TGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTA 214253
|| || | || | | | | ||| || ||||||||||| || | | |||| |
Sbjct 176376 TGAGGGCGGGGGGTGGCGGCCGAGAACAGGGTGGGGCTGGCGTGCGTGAAGTACTTCTCG 176435
Query 214254 GAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGAT-CTGTAGAGC 214312
||||| || ||||||| | | | | | ||||||| |||||| | | | |
Sbjct 176436 GAGAGCAGGTTGTAGGTGGTGATGGCGGCGTCGATGTCGGCGCCGTGGATGCCGATGGAC 176495
Query 214313 GCACCTCATCAGCATGTGCTGGGGCCTCTC 214342
| || ||||||||||||||| |||| |||
Sbjct 176496 AC-CCGCATCAGCATGTGCTGCGGCCGCTC 176524
Score = 134 bits (148), Expect = 3e-26
Identities = 492/758 (65%), Gaps = 42/758 (6%)
Strand=Plus/Plus
Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959
||||||| ||||||| | |||||| || || || || || || || ||||||| ||||||
Sbjct 175094 CAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGA 175153
Query 212960 AGTGTAGGGCTCGA-TGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCA 213018
|||| | ||||| | || | || ||||| || ||||||||||||||| ||| |||||||
Sbjct 175154 AGTGAATGGCTCAAATGAT-TCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCA 175212
Query 213019 TGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGA--TGAGGCGCCGAAGCTC 213076
|||| |||| || ||| ||||| || || || | ||| | || | ||| |
Sbjct 175213 TGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCAC 175272
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| ||||||||| ||| || ||| ||| |||||| ||| | |||||
Sbjct 175273 T--CCAGTCCCA-----CAGGTCTGTGGGTGTCTTTC----CCCACATTTCATATTGCAA 175321
Query 213137 GATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAG 213196
|| |||| || | || | || || | || ||| | | | ||||||
Sbjct 175322 TATTCCTTCACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTCGGCCAG 175381
Query 213197 CTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256
|| ||| || | | || | || ||||||||||||||||| | ||||||||
Sbjct 175382 TTCACAGCTAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATTGAGCTT 175441
Query 213257 CTTGGC-------CTCTGGGGACGTGAAGG-GCATCATCATGCGTTGGAACACATCAGCC 213308
|| ||| |||| | | ||||| |||||| || | || |||| |||
Sbjct 175442 CTGGGCTCCTTCACTCTCGTAA--GGAAGGCGCATCA--ATAC----AAAAGCATCGGCC 175493
Query 213309 AGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCT-C 213367
|| || ||||| || |||||||| |||| ||| |||| ||||||||| | || ||
Sbjct 175494 AGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTTAGACTT-TTTCGCTTCTGG 175552
Query 213368 CAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC 213427
| ||| || | || ||||| |||||||| ||||| || | |||||| ||
Sbjct 175553 GACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCTCAGTTATGATTTTGGTCAC 175612
Query 213428 ATGGGCCAGGTACTCGTGATTGAACACG---TAGCCCCCGTCCTGCACAAACTCAGGCAG 213484
|| || | ||| || | | | || | || |||||| |
Sbjct 175613 TTGTTTTAGTTTCTCAAAAT--CATATGTTTTATTTTCGGT----TACAAACATGTTGAC 175666
Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544
|| || |||| ||||||||| || || || | || ||||||||| | |||||
Sbjct 175667 AGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTC 175726
Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604
||||| || ||||||||| |||||| |||| |||| || || |||| ||||
Sbjct 175727 CGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCA 175786
Query 213605 AGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTA 213642
| ||| ||||| |||||||| || | || |||||||
Sbjct 175787 TGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTA 175824
>seq65
Length=1244346
Score = 138 bits (152), Expect = 2e-27
Identities = 126/159 (79%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480
|| |||||| ||||| || |||||||| || ||||| ||||| ||||||||| || ||
Sbjct 630968 TGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGGAATCCGTAGAAGCATCTAGC 630909
Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATC 48540
||| ||| |||||||| |||||| || |||| || |||||||| || ||||||||
Sbjct 630908 TTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGGTTCTCATTAACAATCCCATC 630849
Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATG 48579
|||||||||||||| || | ||||||||| | |||||
Sbjct 630848 AGAAGCAGCAAAGAATGCCAAGACATGTTTGATAAAATG 630810
Score = 118 bits (130), Expect = 2e-21
Identities = 132/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247
|| || ||||||| ||| |||| ||| |||||||| || | |||||| ||||||||||
Sbjct 631660 AGTCCGGGCATGAGCCCTCTCTTTTTAAGCCAGAAGATGGATGCGAAACTGCCAGAGAAG 631601
Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307
||||||||||| ||||||||||| || | || || ||||| | ||| ||||| ||
Sbjct 631600 AAGATGCCCTCAACTGCCGCGAATGCTACTATTCTTTCACCGAATGTTGCGGTCTTG-CT 631542
Query 48308 GA-GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360
| |||||| | ||||||||| ||||||||||| | || || | |||||
Sbjct 631541 GCCGATCCACTGCATCGCCCAGTCAGCCTTCTTCTTTACACAGGGAAGGGTCTC 631488
>seq216
Length=582351
Score = 84.2 bits (92), Expect = 4e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||| | | | ||| |||||||||||||| || | |||||||| |||
Sbjct 237797 TTCACTTTGTCCTCTAACTTTGAGATACGTTCCAGTTTGCGACGTCTGCATTTGGAAGCT 237738
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | ||||| | | | || || ||| ||||| ||||||||| |||||||||
Sbjct 237737 GCGACTCGGTTTCTTTGCCGTTTGCGCTCCAGTTTGATACGTTCCTGGGAGTCCATGTCG 237678
Query 241619 ATCGGAGACTTGGG 241632
|| || ||| ||||
Sbjct 237677 ATGGGGGACATGGG 237664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931511910376960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |