Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq974 109 6e-19 >seq974 Length=31311 Score = 109 bits (120), Expect = 6e-19 Identities = 261/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Minus Query 94816 CGTTTTTATGATGCTGTAAGTACCCGTCAGGTTTCATTACCAACTCCTATTATGGCTGGA 94875 ||||| || ||||| ||| || || |||| | || || || || ||| |||| Sbjct 395 CGTTTCTACGATGCGGTATCGACGTTCAAGATTTCTCTGCCTACGCCAATCATGTCTGGC 336 Query 94876 GCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGGTTATTGAAGCAGGCGACTCACTG 94935 | || || ||||||||||| || || || || || | || || || ||| ||| Sbjct 335 GTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGTGGTGACAGCCTG 276 Query 94936 AAATCTATTAACAAAACTGCTAACTCAATAATTGAATACATTTCTAAACGTGCCGGTATT 94995 | || || ||| || | | | | || | ||||| |||| | ||||||||||| Sbjct 275 GATTCCATCAACGCCACGTCCAGCGCCATCGTGAAATACGTTTCCCAGCGTGCCGGTATC 216 Query 94996 GGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCTCGTATTGGCATGGGCGAAGTCAAG 95055 || ||||||| ||| || ||||| || | ||| || || |||| Sbjct 215 GGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAGCCCGATTCGCGGCGGTGAAGCATTC 156 Query 95056 CATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAATCATGTTCACAA 95115 || ||||| ||| || |||| || || |||||||| || || ||||| || || || Sbjct 155 CACACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACGGCGGTAAAATCCTGCTCTCAG 96 Query 95116 GGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 95175 || || | || ||||| ||||| || | || ||||| ||||| ||||||| ||| Sbjct 95 GGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCTATGTGGCACCTGGAAGTGGAA 36 Query 95176 AATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGA 95210 | ||||| || |||||||||||| ||||| || Sbjct 35 AGCCTGCTGGTCCTGAAAAACAACCGTGGTGTTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537671142454240