Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq997 109 2e-19 >seq997 Length=29618 Score = 109 bits (120), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 21052 TTGCTGATCGGCTGCTCGACTACACGTACCGTTTACGTGCCAGCGCAATGCGTACCACTG 21111 |||||| | || ||||||| ||| || ||||||||||||||||||| |||||||| | Sbjct 20060 TTGCTGGTGGGTTGCTCGAATACGCGCACCGTTTACGTGCCAGCGCCTTGCGTACCGATA 20001 Query 21112 CCAGCGGAACTGACACAGCCAGTGCTGGTGCCGCTGCCACCGGCTGCCGATTGACGTACG 21171 ||| | || ||||| ||||| || | || |||||||| |||||| | | || ||| Sbjct 20000 CCAACAGACCTGACGCAGCCGATGATAGTACCGCTGCCGCCGGCT---CAATAACATACT 19944 Query 21172 CACAGGCTGTTTACTGGATTGACCCGCTACTGACGGTAATTGACCAGGCTAATAGCCAAC 21231 ||||| || ||||||| | ||||| ||| | || ||||| ||| || | ||| Sbjct 19943 GCCAGGCCGTGCTCTGGATTAAGCCGCTGCTGGCAGTGATTGAGAAGGGCAACAATAAAC 19884 Query 21232 TAGCCGGCATA 21242 | || || ||| Sbjct 19883 TGGCTGGTATA 19873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154927899384448