Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019529.1
Length=111506
Score E
Sequences producing significant alignments: (Bits) Value
seq962 197 1e-45
seq955 98.7 7e-16
seq952 98.7 7e-16
>seq962
Length=32987
Score = 197 bits (218), Expect = 1e-45
Identities = 288/399 (72%), Gaps = 6/399 (2%)
Strand=Plus/Minus
Query 28559 GAAGGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTAGACGTACTGAAGAAG 28618
||||| || || || |||||||||| || ||| |||||| | ||||| |||||||
Sbjct 24390 GAAGGCGTGACCGATAAAGGTTACTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAG 24331
Query 28619 GTAAACCCGTATGATAAAATCGACTTTGAAGCGCAAT-TCATCCCATACAGCTCCGGTGG 28677
||||||||||| || || ||||||||||||||| | || || || | | ||| ||
Sbjct 24330 GTAAACCCGTACGACAAGATCGACTTTGAAGCGGCGTATCCGCCGAT-CGCCAACGGCGG 24272
Query 28678 TCATATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAAGCACTCGAAAATGT 28737
||||||||||| || | ||| || || | ||||| | | || || ||| | ||
Sbjct 24271 CTTCATCTGCTACGGCGAGTACCCGAACATTCAGCACAACCTGAAGGCGCTGGAAGACGT 24212
Query 28738 GTGGGATTACGCCTA-CACCAAAGTCCCATACTACGGCACCAACACACCAATTGATGAAT 28796
|||||||||| ||| || || || ||||| |||||||||||||| || || || ||||
Sbjct 24211 GTGGGATTACAGCTATCAGCAT-GTGCCATATTACGGCACCAACACGCCCATCGACGAAT 24153
Query 28797 GCTATAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGGTTTTGAGTGTCCTA 28856
|||| ||||| || | || |||||| | ||||| |||||||| ||| || || |
Sbjct 24152 GCTACGAGTGCGGCTTTACCGGCGAGTTCGAGTGTACCAGCAAAGGCTTTACCTGCCCGA 24093
Query 28857 ACTGCGGAAACCACGACCCAG-AGAAATGCTCTGTCACCAGACGAGTGTGTGGCTACCTA 28915
| ||||| ||||||||| | | | || || || ||| | || ||||| ||||| ||
Sbjct 24092 AATGCGGTAACCACGACGCGGCACGCGTG-TCGGTAACCCGCCGCGTGTGCGGCTATCTC 24034
Query 28916 GGTAATCCTGGTACTCGTCCATTCAATGCAGGTAAACAG 28954
|||| || | | | ||||| || || || ||||| |||
Sbjct 24033 GGTAGCCCGGATGCGCGTCCGTTTAACGCCGGTAAGCAG 23995
>seq955
Length=33606
Score = 98.7 bits (108), Expect = 7e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 45235 TGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGA 45294
|||||||||||||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct 1505 TGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGA 1446
Query 45295 ATCCTACAGGGCGTGCCAT 45313
|||||||||||||||||||
Sbjct 1445 ATCCTACAGGGCGTGCCAT 1427
>seq952
Length=33737
Score = 98.7 bits (108), Expect = 7e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 45235 TGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGA 45294
|||||||||||||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct 12144 TGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGA 12085
Query 45295 ATCCTACAGGGCGTGCCAT 45313
|||||||||||||||||||
Sbjct 12084 ATCCTACAGGGCGTGCCAT 12066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356686601099878
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |