Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019538.1
Length=231743
Score E
Sequences producing significant alignments: (Bits) Value
seq974 111 2e-19
seq900 86.0 9e-12
>seq974
Length=31311
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 119939 GTTATTCTTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGT 119998
||| || |||| || ||||| | || || |||| |||||||||||||| ||| ||
Sbjct 12 GTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAACAGGGT 71
Query 119999 AGCAGAGCCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTT 120058
|||| ||||| || | | || || || ||| || ||||| || |||||||||||
Sbjct 72 CGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAGTGCTT 131
Query 120059 GTAGAATGGGATTACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGC 120118
||||| ||||| |||||| ||| |||||| ||| |||||| || ||| |||
Sbjct 132 ATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGGCTGCCCAGCGC 191
Query 120119 ACGAATAGCACCAGCATTAATACCAATACCAGCACGTTG 120157
||| || ||| || || || || ||||| ||||| ||
Sbjct 192 ACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTG 230
>seq900
Length=38784
Score = 86.0 bits (94), Expect = 9e-12
Identities = 67/79 (85%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839
|||| || |||||||| |||||||||| ||||||||||||||| ||||| ||||||||
Sbjct 19461 TCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGA 19402
Query 199840 GTCCTGTATCACCGACCAC 199858
|||| | || ||||||||
Sbjct 19401 ATCCTCTCTCGCCGACCAC 19383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741432972992720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |