Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq955 80.6 8e-11 seq952 80.6 8e-11 >seq955 Length=33606 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 44194 GCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAA 44253 || || |||| ||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 1504 GCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAA 1445 Query 44254 TCCTGTACGGGGTGCCA 44270 |||| | || |||||| Sbjct 1444 TCCTACAGGGCGTGCCA 1428 >seq952 Length=33737 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 44194 GCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAA 44253 || || |||| ||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 12143 GCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAA 12084 Query 44254 TCCTGTACGGGGTGCCA 44270 |||| | || |||||| Sbjct 12083 TCCTACAGGGCGTGCCA 12067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157923035575456