Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019541.1
Length=45364
Score E
Sequences producing significant alignments: (Bits) Value
seq968 329 9e-86
seq997 116 1e-21
>seq968
Length=32144
Score = 329 bits (364), Expect = 9e-86
Identities = 739/1098 (67%), Gaps = 23/1098 (2%)
Strand=Plus/Plus
Query 36193 GAAAAATGGATTGGTCCATTCATTCTGGACAATGTTGAACGTAGCCGGGTGCTGTGTAAT 36252
||||| |||||||| ||||| ||||| || ||| |||| || | | | | || |||||
Sbjct 366 GAAAAGTGGATTGGCCCATTTATTCTAGATAATCTTGATCGAAACATGATCGTGAGTAAT 425
Query 36253 TTTGTGGCCACAAATGGACTTTATACCGTTTCTTCAGGTGGGAAT---CAGGCCGCTGTT 36309
||||||||||| |||||| | ||| || || ||| ||| ||| | | |||
Sbjct 426 TTTGTGGCCACCAATGGATTGTAT-----TTGACCAA-TGGTAATTTTCAGTCACCGGTT 479
Query 36310 AACGTCACGATTGAAGTTGAAGTAACACCGGTAAATGAATCTGGTGCAGCGATTGGTAAT 36369
||||| || | ||||||||||| || ||||| ||||| | | | ||||| ||
Sbjct 480 AACGTAACAGTCGAAGTTGAAGTTACTCCGGTGGATGAAAACGATCAGGATATTGGATAT 539
Query 36370 CCGATGCTGAAG-CAGATCATTTTGAAAGGTTCGGCAAAGTCGCGTCAAACCGTTGGCGC 36428
||||| || ||| ||| | || | ||||| ||||||| | ||| |||| || ||
Sbjct 540 CCGATTCTTAAGTCAGTTG-TTCTAAAAGGGTCGGCAACTGCCCGTGAAACTGTGGGTAT 598
Query 36429 AACGCTGGATATGGTGACATTTCAAGGTCGCTGTAGTGTCCGTGCACGTCGTTTAACACC 36488
||||| || ||||| ||||| ||||||| || ||||| |||||| | | |
Sbjct 599 GACGCTATCAATTTCAACATTCCAAGGGCGCTGTAAAGTTCGTGCTCGTCGTGTCAATCA 658
Query 36489 AACACCGGCGG--TTACA----ACGGTAGTAGATGAAGTAAAGTGGCAGGCGCTTTATGG 36542
|| || || || || || || || || || || ||| ||||| || ||
Sbjct 659 GACTGATAAGGACTTTCAGGGCACCGTCGTTGACGATGTGAAATGGTCTGCGCTGTACGG 718
Query 36543 TGCTTATCCTTTGCAAAGCACAGTGTATGAACATGAAACGGTTTTTCGTGCGCGCACTTA 36602
|| |||| || || | |||| |||||| ||| |||||| |||| || | || ||
Sbjct 719 GGCACATCCGTTAAAACGGTCAGTCTATGAAAATGGTACGGTTGTTCGCGCAAGAACATA 778
Query 36603 TGCAACCACTGGAGCTTTATCTGTTAAGTCCCGCAAGATCAATTTTGATCTTCAGCGGAT 36662
|||||| | || |||||||| || || || ||| | ||||| |||||||
Sbjct 779 TGCAACTGCGGGTGCTTTATCCGTCAAAGAGCGAAAGCTTAATTTGCTGGTTCAGCGAGA 838
Query 36663 GTTACCGACTTTTAAAAACGGCGCAATGACGACAGAGCTATTTCCAACATCAAGCTTTGC 36722
|| ||||||| | |||| || ||||| || || | | | | ||||| ||||||||
Sbjct 839 ATTGCCGACTTATGAAAATGGTGCAATTACTACGGCCCGACAAGCGACATCTAGCTTTGC 898
Query 36723 TGATGCATTGGTTTCAATGGCACTGGATGACAAGATAGGCCGCCGTACGATCGACGAAAT 36782
||||| || |||||| |||| ||| || || || ||| | | || | |
Sbjct 899 CGATGCGTTAGTTTCATTGGCCACAGATCCAAAAATTGGACGCATGTCTTTGGATAATCT 958
Query 36783 AGATCTGGAAAATATCTATCGGACTTATAACGATGTAGTTGATTATTTTGGTACACCACT 36842
||| | || |||||||| ||||||| | || ||||||||||||| || || |||||
Sbjct 959 GGATTTAGATAATATCTACGAGACTTATCATGACATAGTTGATTATTTCGGAACCCCACT 1018
Query 36843 TGCGGCTGAGTTCTGTACTACGATTGATGATACAAACCTGTCTTTTGAAGAGCTGGTCAC 36902
|| || ||||||||||||||| |||||||| |||| |||| |||||||| | | ||
Sbjct 1019 GGCTGCCGAGTTCTGTACTACGCTTGATGATTCAAATGTGTCATTTGAAGAAATTGCCAA 1078
Query 36903 CAATCTTTGTGATGCCGTGTTTTGT-ACTGCATATCGTCAAAATAATAAGCTCAAGCTTT 36961
| || ||| ||||| | || ||||||||| || ||||| | |
Sbjct 1079 GATGATTGAAGAT-AGTTGTTTCATAACGATCTATCGTCAAGGTACCAAGCTTCGCGTGT 1137
Query 36962 ATTTTGAACGTCCAACTGATAACTCGGTAATGCTATTTAACTTCAGGAATATTATTCCTG 37021
|||||| |||| ||| || || || | |||||||||||||||||||||||
Sbjct 1138 TTTTTGAGAAGCCAAGTGACAATTCATCTTTGTTGTTTAACTTCAGGAATATTATTCCAA 1197
Query 37022 ATAGTTACAAGCATGATCTTACCTTTGGCGTGATGGATGACTACGATGGACTGATCTATG 37081
| | | ||| | || ||| ||| | | |||||| | || || | | ||||
Sbjct 1198 AGACATTTGAGCCGTCGCGTAACTTCGGCATCACGGATGATTTTGACGGTATTGTTTATG 1257
Query 37082 AATACACGGATCCGGCCGACGATAGTCGTATCAATATCTATCTACCGGATAAAGGGGCCA 37141
| | || ||||| ||||| || | |||||||||||||| | || ||| | | |
Sbjct 1258 AGTGGACCGATCCATCCGACAATGGCCGTATCAATATCTACTTGCCTGATCAGAACGTAA 1317
Query 37142 AGAACCCCAAAGAGGTGAAATCTGTAGGTGTGCGTAACAAGTGGCAAGCTCATTTTAATG 37201
||| || || ||| | ||||| || || ||||||||||||||||| || ||||| ||||
Sbjct 1318 TGAATCCAAAGGAGATTAAATCAGTTGGGGTGCGTAACAAGTGGCAGGCGCATTTCAATG 1377
Query 37202 CGTACCGGCTTTGGAACAAGCTTCGCT-TCCAGCGCAAATCCATT-ACCTTTGATGCGGC 37259
| | || |||| ||||| | | || | | ||| |||| | ||||| || ||
Sbjct 1378 CTCATCGTCTTTACAACAAATTGGTATATCAAACAGAAA--CATTGAAGTTTGAAGCTGC 1435
Query 37260 ACCTGAGTCAGAATTACT 37277
|||||||| ||||||||
Sbjct 1436 TCCTGAGTCTGAATTACT 1453
>seq997
Length=29618
Score = 116 bits (128), Expect = 1e-21
Identities = 294/441 (67%), Gaps = 6/441 (1%)
Strand=Plus/Minus
Query 18488 ACTCGTGGTATGCGAAAGTTTGGTGATAAGTTTGGCCGAATTGGCTTATGGGTGATGAAC 18547
|| ||||| |||| |||| || || ||||| ||| | | | | || ||| ||
Sbjct 9217 ACACGTGGCCTGCGTAAGTACGGCGACAAGTTCAACCGTGTCGTGCTCTTCGTTATGCAC 9158
Query 18548 TCAGATACATATTTCGATATTGTCGATGATGCTATCACTAAGCAAATTTACGGTGAATCT 18607
|| | ||| || ||||| || || ||||| || ||| | || |||| |||| ||| |
Sbjct 9157 TCCGCTACCTACTTCGACATCGTGGATGAGGCGATCGCCAACAAAATCTACGAAGAAGCG 9098
Query 18608 GAAATCGTTATCTATGGTGGTTTACCAGGAACCTTAGGAAAGCCGGTATTGGTGACGGAT 18667
| | || | || || || || || ||| | || || ||||| |||| || |||
Sbjct 9097 GGCGTAGTGGTTTACGGCGGACAGCCGGGCACCCTGGGTAAACCGGTGCTGGTTACCGAT 9038
Query 18668 GC--TGTAGG-TGATAACGATGCTTTTGGCTTGCAGTATGGTGCTGTAACAGTAACTGAA 18724
| || | | |||| |||| ||| |||| | | || || || || ||||||||
Sbjct 9037 ACCATGGACGCTGATG-CGATCCTTG-GGCTGGTGGCCGGG-GCAGTGACTGTAACTGAG 8981
Query 18725 TCACAAGTACCGGGCTTCCGAGCTTATGACATCAATGATGAAGAAAACTTAGCAATCGGT 18784
|| || | ||||| ||||| | || |||||||| ||| | |||||| | ||||||||
Sbjct 8980 TCTCAGGCTCCGGGGTTCCGTTCATACGACATCAACGATCAGGAAAACCTGGCAATCGGC 8921
Query 18785 ATGCGTGCTGAAGGTGCATTTAACCTAGATATTCTTGGTTATAGTTGGGATACATCGAAA 18844
||||||||||| | | || | ||| | || ||||| || ||||||| || |||
Sbjct 8920 TACCGTGCTGAAGGCGTGGTGAATGTCGATTTGCTGGGTTACAGCTGGGATATCTCCAAA 8861
Query 18845 GGTGAAAATCCTGACCTTACATTACTTGGTTCAAGCGCTAACTGGATTAAATATGCAACC 18904
||||| || || ||||| || | | || | | |||||||| || | |||
Sbjct 8860 GGTGATAACCCGGACCTGACCAAAATCGGCACTGCAGGTAACTGGAAGAAGCACTTCACC 8801
Query 18905 AGCAACAAAATGACAGCAGGT 18925
||||||||| ||| || |||
Sbjct 8800 AGCAACAAATCGACGGCTGGT 8780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145040110035928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |