Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq974 170 2e-37 >seq974 Length=31311 Score = 170 bits (188), Expect = 2e-37 Identities = 250/354 (71%), Gaps = 0/354 (0%) Strand=Plus/Plus Query 51449 CCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAGTGCCACAGGGGGATGTAC 51508 ||||||||||| |||||||| | | | || | | |||||||| ||| | || Sbjct 7 CCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAAC 66 Query 51509 CCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGA 51568 ||||| ||||||||||| | ||||||||||||||| || || | |||| || Sbjct 67 AGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAG 126 Query 51569 TACTTGATGAACGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTACCA 51628 | ||| ||||||||| ||| ||||| | || ||||||||||| || || || Sbjct 127 TGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGGCTGCCC 186 Query 51629 ATACCACGGATTGCCCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACG 51688 | ||||||| ||| || || |||||||| || || | || || || | ||| Sbjct 187 AGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTATTTCACG 246 Query 51689 ATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACAT 51748 |||| ||| ||| |||||||| || |||||| |||||||| || ||||| || || Sbjct 247 ATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGTACGCAG 306 Query 51749 GAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAGA 51802 ||||||||||||||||| || || || || || | |||||| || || || ||| Sbjct 307 GAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487627464708880