Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019927.1
Length=47611
Score E
Sequences producing significant alignments: (Bits) Value
seq986 841 0.0
seq1102 98.7 3e-16
>seq986
Length=30461
Score = 841 bits (932), Expect = 0.0
Identities = 929/1235 (75%), Gaps = 2/1235 (0%)
Strand=Plus/Plus
Query 6010 TTTCTTCACCTTTAAAATATATCGAGGGCGCTGCTTAACCTCAGTGTAAATTCTTCCAAT 6069
||| || ||||||| | || ||||| || ||| || | ||||| ||||||||
Sbjct 11740 TTTGTTACCCTTTAACAGGTAGCGAGGCCGTCCCTTGCTTTCGATATAAATCCTTCCAAT 11799
Query 6070 ATATTCCCCCAGGACACCTATCCCTATAAGCTGGACGCCGCCAAGGAAAAGGATAGAAAC 6129
|| || || || ||||| || || ||||| || || || |||||||||||||| || ||
Sbjct 11800 GTACTCTCCGAGCACACCAATGCCGATAAGTTGCACACCACCAAGGAAAAGGATGGAGAC 11859
Query 6130 CAGAAGGGATGGATATCCGCGAACCGGGTTGCCAAAGGCAAGCGTGTCGACAATCATCCA 6189
|| | || ||||| || || || | |||||||| || || ||||| |||||||||||
Sbjct 11860 AAGTAATGACGGATAGCCACGCACAGCATTGCCAAAAGCCAGAGTGTCTACAATCATCCA 11919
Query 6190 CGCTCCATAGAGAAATGACAGCCCGGCCACTAACAA-CCCAATGTACGTCCACATTCTCA 6248
|| ||||||||||||| || || || || ||||| ||| || || |||||||| | ||
Sbjct 11920 TGCGCCATAGAGAAATGCGAGACCTGCAAC-AACAAGCCCGATATAGGTCCACATGCGCA 11978
Query 6249 GAGGAAAGGTCGAGAAGCTGGTAATACCCTCAAGCGCGAGATTCCAGAGTTTCCACCCGT 6308
|||| ||||| ||||| ||||| ||||||||||| || || ||||| | ||||| || |
Sbjct 11979 GAGGGAAGGTAGAGAAACTGGTGATACCCTCAAGAGCAAGGTTCCATAACTTCCAACCAT 12038
Query 6309 TAAATTTGGTGCTTCCTGCCACGCGTTCAGCGCGCGAATACTCAACTACGTCAGTGCGTC 6368
||||||| || || ||||| |||||||||||||| | ||| ||||| || || ||||| |
Sbjct 12039 TAAATTTTGTACTGCCTGCAACGCGTTCAGCGCGGGCATATTCAACAACATCCGTGCGAC 12098
Query 6369 CGCCGACCCATGACAGGACTCCTTTCATGAACAGGTTCCGCTCAGGCATTAGCTTGATGT 6428
| || ||||| ||| ||||| |||||||| ||||| | ||| ||||| ||||||||||
Sbjct 12099 CACCAACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTCTCTCTGGCATGAGCTTGATGT 12158
Query 6429 TTTCTACTACCTCACGAGACATCAGGCGAAAATCACCCACGTTTTCCTCGATTTGTGGGT 6488
|||| || |||||||| |||||||| || |||||||| || ||||||||||| || ||||
Sbjct 12159 TTTCGACCACCTCACGGGACATCAGACGGAAATCACCGACATTTTCCTCGATCTGCGGGT 12218
Query 6489 TGCTTATTTTGTTGTGCAGCTTATAGAACATTTCAGCGCTTTTGCGCTTCAGGTGACCGT 6548
| || ||||||||||||| |||||||||| || || ||| || ||||| ||| |
Sbjct 12219 TACTGATTTTGTTGTGCAACTTATAGAACCACTCGGCAGATTTACGTTTCAGACGACTAT 12278
Query 6549 CAGTGGAGCGGTCTGTGCGTTTAGCCAGTACCATATCTGCGCCAGTCTGCCAGCGCTGTA 6608
||||||||||||| | ||| || ||||||||||| || || || | |||||| || ||
Sbjct 12279 CAGTGGAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGGCCCCGGCCTGCCATTTCTCTA 12338
Query 6609 TCAACTGCGGGATAACATCAATTGGGTCCTGCAGGTCGACGTCGATTGGAATCACCGCCT 6668
||| ||||| || || |||||||||||||||| ||| ||||| || || || | || |
Sbjct 12339 TCAGATGCGGAATGACCTCAATTGGGTCCTGCAAGTCTACGTCAATCGGGATAATTGCTT 12398
Query 6669 CGCCGGTGGCATGGTCAAGGCCTGCAAATAACGCTGGCTCCTTTCCGAAATTGCGTGTGA 6728
| || || || ||||| ||||| || ||||| || ||||| ||||| || ||||| ||||
Sbjct 12399 CACCTGTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCTCTTTTCCAAAGTTGCGGGTGA 12458
Query 6729 AGGATAGGGGCACAACAAGCGGATCTGACACGGCCAGCGCATTGATAATCGACTCTGTAG 6788
|||| || || || ||||||||||||| | || ||||| || ||||| || || || |
Sbjct 12459 AGGAAAGAGGAACCACAAGCGGATCTGCAATAGCAAGCGCGTTTATAATTGATTCGGTCG 12518
Query 6789 CGTCTTTGCTGCCGTCATTGATAAATACGATTTCCACCTCAAACGATTTGAGCGGTTCAT 6848
| |||||||| ||||||||||| || || || || || || | || | | ||||
Sbjct 12519 CATCTTTGCTACCGTCATTGATGAAGACTATCTCAACTTCCTGCTGCTTTAACCCTTCAA 12578
Query 6849 ATTCTCTGACGGTTTTATAGAAAATAGGTATTGTGTCTTCTTCATTGAAGACAGGAACCA 6908
| || | |||| ||| ||||| || || |||| || |||||||| || || ||||| |
Sbjct 12579 ACTCCCGCACGGCTTTGTAGAAGATTGGAATTGCTTCCTCTTCATTAAACACCGGAACGA 12638
Query 6909 CGAGTGAAATCTTCATTTTGCTTCCCTGAAGACAATGTATTTCGAATAGATAAACCCGCA 6968
| || ||||| ||||||| || ||||| ||||||||| | || |||||||| || |||||
Sbjct 12639 CCAGAGAAATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGATGAAGCCGCA 12698
Query 6969 CACCAGGCTGATTGCCGAGAACACGACCAGCGTAACCACGGGTGGTAGAGAGCATTCATC 7028
|||||| ||||| || ||||| |||| | ||||| | || | || ||| ||
Sbjct 12699 CACCAGACTGATGGCGGAGAAAACGATTAACGTAATAATCGGGGCAAGCCCTGATTTGTC 12758
Query 7029 GGCAGCCCATCCCACAGCCGCGCTAAGAGAACCCATGAAACCTACGTAAAGCATGTAGCG 7088
||| ||| || || || ||||| || | |||||| || ||||| || |||||||||||
Sbjct 12759 AGCACACCAACCAACGGCGGCGCTCAGCGTACCCATAAACCCTACATACAGCATGTAGCG 12818
Query 7089 CGTCGTGGTTGTAGAACTGTTGAACGTAAAGCGAGCGTTTGCAAAGAAGCTAAAGCTTAC 7148
| | || ||||||||| || || || || | |||||||| || |||||||| ||
Sbjct 12819 CATGGTCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTTTGCGAAAAAGCTAAATGACAC 12878
Query 7149 CGCAACAACGAATCCGCTGAAGTTCGCCAGCGCCTGGCTGGTTCCTAATGCATAGAAGCA 7208
|||||| || |||||| |||||| ||||| || || | || || | || | |
Sbjct 12879 CGCAACTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCCTGTGTGGAAGACGTAAATAGA 12938
Query 7209 CGCGGCAAATACCACCCAATGGATTAGCGTGTTGA 7243
||| || || ||||| || || ||||||||||
Sbjct 12939 AATGGCGAACACAACCCAGTGAATGAGCGTGTTGA 12973
>seq1102
Length=22075
Score = 98.7 bits (108), Expect = 3e-16
Identities = 60/64 (94%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 7474 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAATTAAATCAAGAAC 7533
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215
Query 7534 TTAT 7537
||||
Sbjct 2214 TTAT 2211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152230356853444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |