Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019934.1
Length=39012
Score E
Sequences producing significant alignments: (Bits) Value
seq1547 486 5e-133
seq1620 306 9e-79
seq960 203 8e-48
seq732 188 2e-43
seq1047 168 2e-37
seq997 86.0 2e-12
>seq1547
Length=4346
Score = 486 bits (538), Expect = 5e-133
Identities = 1619/2497 (65%), Gaps = 89/2497 (4%)
Strand=Plus/Plus
Query 1811 CTCGAAGTTTCCGTTTTTGTCCAGGCGCCAGCCAGTGCGACCT-GCCACATAGTTCGTGG 1869
|||||| |||| ||| ||||| | ||| || | |||| || || ||||| |||
Sbjct 1736 CTCGAATGTTCCTGATTTATCCAGCCTCCATCC-GACAGACCCAGCAACGTAGTTATTGG 1794
Query 1870 ACTGTATGAATGCGCCAATTTTGGCACTGGTAATGGTGCCATCCTGAATAAAGGCAGAGT 1929
|||| ||||| |||| ||||||||| |||| || ||||||||||||||||| || |||
Sbjct 1795 ACTGGATGAAGTCGCCGATTTTGGCATTGGTGATCGTGCCATCCTGAATAAATGCGGAGC 1854
Query 1930 TCATAAACACCTGCCCGCCCACCACAGCAAATGGCGAGAACTGGCTGGC----------- 1978
||||||| ||||| || | ||||| ||||| ||| ||||| | |
Sbjct 1855 TCATAAAGACCTGACCATTGATGACAGCGAATGGAGAGTACTGGGTATCNNNNNNNNNNN 1914
Query 1979 ---------------------------ACCGCTGCCGGTGGTCAGCACAAACTGATCGGC 2011
||||||||| | ||||||||||||| | ||
Sbjct 1915 NNNNNNNNNNNNNNNNNNNNNNNNNNNACCGCTGCCACTCATCAGCACAAACTGGTTAGC 1974
Query 2012 ATTAAACGCAACACGCGTTACAACTGGCTGCCCGGCCTGCGCCAGTACCGCGATGCTCAT 2071
|| || |||| || || || || |||| ||| |||| || || || || || |||
Sbjct 1975 GTTGAAACCAACTCGGGTGACTACCGGCTTCCCCGCCTCTGCAAGCACGGCAATAGACAT 2034
Query 2072 ACCTGCGCTGTAATAGTCGCCGTTAATCCGCACGCCTGCTTTCAGCGTATGAATGGCTGT 2131
|| ||| |||| | ||||| || | ||| |||| ||| || || | || || |
Sbjct 2035 CCCAGCGTTGTACATCACCCCGTTTATTCTCACACCTGTTTTGAGGGTGTAGATTGCCGA 2094
Query 2132 CGCCCCACTGGCATCCACCACGGCGGTTAGCTTGTCTTCCAGCGCGGCCGTGACACTGCC 2191
|| || |||||| || ||||| || |||||||||||||| | || ||||| |
Sbjct 2095 AGCACCGGAGGCATCTACGACGGCTGTAAGCTTGTCTTCCAGGGAAGCGGTGACGTCCTC 2154
Query 2192 TATCTGCGCCTGGACCTGAGTGCTCATTTCCGCCAGAGCCTTATCAACGTCGGCGATAGT 2251
|||||||||||| ||||| || | ||| |||| ||||||||||| || || || ||
Sbjct 2155 TATCTGCGCCTGTACCTGCGTCGAAAGTTCGGCCATTGCCTTATCAACTTCAGCAATCGT 2214
Query 2252 GGTTTTCACCACCAGAATATCGGCGCGCACTTCACCATACTGCTTCCACTGATGATCGAC 2311
||||| || ||||| |||||||| |||||||| || || || |||||| || || ||
Sbjct 2215 CGTTTTTACAACCAGGATATCGGCACGCACTTCCCCGTATTGTGCCCACTGGTGCTCCAC 2274
Query 2312 CGTGGCGTTGTTCGCCAGTGCGTTCTGCATCACCGCCTCGATGTTAGTGTCGAT-TTGCT 2370
|| ||| |||||| || |||||||| | | |||| ||||| || || || | |
Sbjct 2275 AGTTCCGTGGTTCGCAAGGGCGTTCTGTAGTATTCCCTCAATGTTTGTATCTATGTCACC 2334
Query 2371 GCTGCAGCGCCTGACCGTCGGCACTGGTGAGAAAATCCCCGGTAATATCACCCAGGTAAT 2430
|| ||| || || || ||| ||| |||||||| | ||||| ||||| ||||
Sbjct 2335 AGTGAGGCG-CTCCCCATCAGCAGAGGTAAGAAAATCGTTAGCGATATCGCCCAGATAAT 2393
Query 2431 CCTCCGCGATGTCGTTCGCCATGCCCCGCACCCAGCCGGTCCATGCTGACTGGTTCCCGA 2490
| || ||| | ||||| | ||| ||||| | |||| |||| | | |||| ||| ||
Sbjct 2394 CATCGGCGTTATCGTTAGACATTCCCCGGATCCAGTCGGTATACCCGGACTCGTTACCCG 2453
Query 2491 TGCGGTCCACCAGCCGTGCGCGGTACCAGAAAATCTGCCCCGCACGCAGGCCAAGCTGCG 2550
| | ||| || ||| |||||||||||||||| |||||| || ||||| ||||| |
Sbjct 2454 TTCTGTCGACAAGCTGTGCGCGGTACCAGAATTCCTGCCCTGCTTTAAGGCCGAGCTGGG 2513
Query 2551 TGTAACTGTGC-GCCGGATACGGCACATCCGAAAGCAGCAGCGCGTCGCTACCGTCGCTC 2609
||| | | || | ||||| ||||| || || |||| | | || | ||| ||
Sbjct 2514 TGT-ATTCCGCAGATGGATAAGGCACGTCTGAGAGCAAGAATGGATCTGAAAAGTCACTG 2572
Query 2610 GCGGCGGCATACTGAATTTCGGTCATCAGCGTATCGTCAGCACCGTCAGGGAAGTTCCAG 2669
|| | ||||||||||| || | ||||||||| | | | ||||| ||||
Sbjct 2573 TTTGCTGTGTACTGAATTTCCGTTTTTAGCGTATCGCCGGTGTTTGCCGGGAAACCCCAG 2632
Query 2670 TCAAGCTGGATGCCCCAGTTAATCGGCGTGGTGCGGAAGTTCAGCGGTACCGGCGGCTGC 2729
| ||| | || ||||||||||| ||||| | ||| | || || || |
Sbjct 2633 TTAAGACGAATCCCCCAGTTAATGCCCGTGGCGGTGAATCCTACTGGCTTAGGTGGATTG 2692
Query 2730 CCCACCTTGCCGGTCAGCGTCACTTCCACGCTG-GTCTGCCAGACCGAGGCGACAT---C 2785
||||| |||||||||| ||| |||| ||| | | || ||| | || || |
Sbjct 2693 CCCACTTTGCCGGTCAACGT--CTTCTCTTCTGAATATCCCCATCCG-GAAGAAATTTCC 2749
Query 2786 GCTGGCGTTTACGGCGCTGACGCGCGCCATGTACCGCCCGGCATAAATGCCCAGCACCTC 2845
||| ||||| | || | |||||| ||| ||||||||||| |||||| ||| || ||
Sbjct 2750 GCT-GCGTTGATAGCACGCACGCGCACCAGGTACCGCCCGGAATAAATCCCCGTAACGTC 2808
Query 2846 -AAAGCCGAG--CGAGCTTGTGCGCGGCACATTCACCCAGTCGCCGTTATCCTTGCGCCA 2902
|| | || | |||| |||||||||| || ||||||| || | | ||||||
Sbjct 2809 GAATGACGTGGTGGAGC---TGCGCGGCACGTTAACCCAGTTCCCCTCGTTGCGGCGCCA 2865
Query 2903 CTGGCATTCATACGTCACCGCGCCGGGTGCCGCGGGCCAGGCGACACGCAGGGTTTCCAC 2962
|| |||||| | | ||| | ||| | |||| || |||| ||||| ||
Sbjct 2866 TTGCGCTTCATAGGCGATAGCGTTCTGCGCCTGGTCCCAGCTCACGCGCATCGTTTCGAC 2925
Query 2963 GCTGAGA---CCCTGCACCACGCGGCTGTAAC-TGCTGAGGGTCACGGAG---GCTGGCG 3015
||||| | |||||||||| ||| ||||| ||||| | || ||||
Sbjct 2926 GCTGATATTTTGCTGCACCACG----GAAAACGAGCTGA---TCACGATGTTTGCAGGCG 2978
Query 3016 GTGCCTGCACGCCCGGTGGAATGGCTGATACCGGACGCTCATCGAGCCGCGCGCCGGAAT 3075
| | ||| |||||| || || | ||||| |||| || | | || |||| ||
Sbjct 2979 GCGACTGGTTGCCCGGCGGGATCACGCTCACCGGCCGCTGGTCAATCATGGCTCCGGTAT 3038
Query 3076 CGATGGCGGCATATTTATCCGGGTTGTGCTGCACGGCGCTGATGGTCCAGGTGCCGTCGT 3135
| ||| | |||||||||| | ||| | | | ||||||| | || ||||| |
Sbjct 3039 CAATGCGATCGAATTTATCCGGATCGTGATTTGCCCCCGTGATGGTATAAGTCCCGTCAT 3098
Query 3136 TATTGTCTTCAACGGACGTGACGCGGTACTGCT--GGATTGCCACATCCTGCGCATCCAC 3193
| || || || | || | |||||||| | || | | || | | || |
Sbjct 3099 TGTTATCGGTGACACTAATTACCCTGTACTGCTGCGCATAG--AGTTCATCAGATTCAAT 3156
Query 3194 CGACCAGACCGCCTCGCGCTCCGGCGTTTCGCTGAATACCGCAGATACCGTGACGTTTCG 3253
||| || |||||| || || ||||| || | | | || ||||| ||
Sbjct 3157 AACCCATACAGCCTCGGCCTGTGGAAGCTCGCTAAAAGCGGTGGTCACGGTGACCATTTC 3216
Query 3254 GCCGCTGACCGCCTGAAGGGTACGGGCCTGTGATTTGCCGGACGGCAGGTTGACGATAAG 3313
||| | | ||||| || |||| || | | || || |||||||| || || |
Sbjct 3217 ACCGGACAGGGACTGAATCGTTCGGGATTGAGTGATACCCGATGGCAGGTTTACCATTAT 3276
Query 3314 CCTGTCGCCCGCTTTTGCATCCGGCGCCCGGTCGAGCGTCAGCGCGCGACCGTTCACCTG 3373
|||||| || || || ||| || ||||||| || | || | || || || |||
Sbjct 3277 CCTGTCACCGGCCTTAGCACTTGGTACCCGGTCAAGTTTGAGAACACGCCCATTAACC-- 3334
Query 3374 ACTGATA--CGCCCGCCCATCACCCGCCCCGACAGATACTGATCCGCCACGCCGATGATA 3431
| |||| || ||||| | | | || || |||| |||| | || | || ||
Sbjct 3335 GCGGATAATCGACCGCCTAAATCTCTTCCTGAAAGATTTCGATCAGAAACAGCAATTATG 3394
Query 3432 TGGCCCGGCAGCGGGATCATGCCTTCCAGCCCAGTGGTGAAAC-TCACCATCCGGTCTTT 3490
| ||||||| | || || | || ||||| ||| || |||| | || |||| |||||
Sbjct 3395 TAGCCCGGCTGAGGAATATTACCGTCCAGACCA-ACGTCAAACGTTACAATCCTATCTTT 3453
Query 3491 AGCATTTGTCAGCAGCGCCCAGCGGCCGCGGCGGTTGGCCTCGGTACGCCGCGTGCAGCC 3550
| || ||||| | | ||||||| || | ||| ||||| | |||| ||||| ||
Sbjct 3454 ATTGTTGGTCAGGATCCCCCAGCGCCCTTTCCTGTTAGCCTCAGACTGCCGGGTGCAACC 3513
Query 3551 GATGGCGGATATCTGCGTCTGGCGCACGCCGTAGCGCCGCACCAGATCAGGCTCCATCAC 3610
|||||||| |||| |||| | || |||||| |||||| || | || | ||
Sbjct 3514 GATGGCGGTGATCTCGAGCTGGTTGAAACCATAGCGCGCCACCAGCTCCTGTTCGAAGAC 3573
Query 3611 CGCTTCCACTTCATCGGTGTAATGGTTCTCCGGGTTTGACCAGCTCACCATCGCCGTTGA 3670
| |||| | |||| | || || |||| | |||||| || | || |||
Sbjct 3574 TGGCTCCATTGCATCAGCATAGCCATTTGCCGGATCAGACCAGGATACAAGAGCGTTTGT 3633
Query 3671 ATAACGGTTCTTCTCGCTGCCGCTGGCGTAGGAGAATTTGCCGTCAATAACGTTGGCGCG 3730
|| || | || ||| |||| || ||||||||||| | ||||| ||| |
Sbjct 3634 GTAGCGACTTTTAGTTGTGCTACTGGAATACACAAATTTGCCGTCGACTACGTTAGCGTG 3693
Query 3731 GGTGTAGACATACGTCATATCGCGCGGCATATCCGCCAGCGCGGCCAGCTGATTACCGGC 3790
|||||| | | | ||| | ||||| || || || || | | ||| | | |
Sbjct 3694 CGTGTAGGTAAAATCGACATCTCTGGGCATGTCTGCAAGGGCAACAATCTGGTCGTCTCC 3753
Query 3791 CCAGTATGTCATGCCGCGGAAGATGCTCGCCAGGTCGCGCAGCACCGTAAACGCCTCGTT 3850
|||||| |||||||| || || ||| || | || ||||| || || | || || ||
Sbjct 3754 CCAGTAGGTCATGCCTCGAAAAATGGCGGCAAAATCTCGCAGGACGGTGTAAGCGTCATT 3813
Query 3851 CTGGCTC-TGGATATACACGTCGCAGAGAAAACGTGGCTCAGTACCGCTGCCGCCGGTAC 3909
| | || || || || |||| |||| ||||||| ||||| ||||||||||| |||
Sbjct 3814 -TCGATCTTGAATGTATACGTTGCAGGTGTAACGTGGTTCAGTTCCGCTGCCGCCCTTAC 3872
Query 3910 CGTCCGGCACGGGCTGATCGCAGTGCTGCGCGATGCGGTAGAGTTCCCACTTGTCCACCT 3969
| ||||| || | ||||| || | || |||| | || || ||| ||||| | |
Sbjct 3873 CATCCGGTACCGATTGATCACAATATTGAGCGACCTGATAAAGAGTCCATTTGTCGATGT 3932
Query 3970 GCGTCGCATCCAGCCGGTCTCCGATCCCGAAACGGTCACTTAGCACCAGGTCGTAAAACA 4029
| || ||||| | || | ||||| |||||| | | |||||| |||||||| |
Sbjct 3933 TGGCTGCCGTTAGCCGATTACCAAGGCCGAAGCGGTCAGTGACCACCAGATCGTAAAATA 3992
Query 4030 CCCATGCGGGATTATTGCTCCAGGCCCATTTAAACGAGCCGTCCCAGGTGCCGGAATAGG 4089
||| || || |||| |||| ||||| ||||| | ||| |||||||||| || |
Sbjct 3993 TCCACGCAGGGTTATCCGTCCATGCCCACTTAAATGCGCCCGTCCAGGTGCCGCTGTACG 4052
Query 4090 TGCGCGCCACCGGATCGTATGTCGTGGGCACGCGGATTTGCCGCCCGCG-GGCGCGTACG 4148
| || | |||| || || || |||||| || || || ||||| ||| || | |
Sbjct 4053 TTCGTGTTTCCGGGTCATAGGTATCGGGCACACGAATAACACGTCCGCGAGGCTCGCA-G 4111
Query 4149 CTGATTTGCGGAATATTGC---TGAACTGCTTCGCGTTGAACGACACAAAGAGCAGCGCG 4205
||||||||||| || ||||||| ||| | || | | || ||||||
Sbjct 4112 GAAATTTGCGGAATTGAGCCATTGAACTGGCTCGAATCAAATTCGATGTACAGTAGCGCG 4171
Query 4206 GTGTTCGGGTAGCGCAGCTTTGCATCGATGATTTCGG 4242
|||||||| ||||| || || || ||||| | |||||
Sbjct 4172 GTGTTCGGATAGCGAAGTTTGGCGTCGATTACTTCGG 4208
>seq1620
Length=3322
Score = 306 bits (338), Expect = 9e-79
Identities = 386/525 (74%), Gaps = 14/525 (3%)
Strand=Plus/Minus
Query 36474 GTCGTATAACACGGCGACAGCATTTCCCGCTTCATCTGCCACGCCTGCTGGATACCCTGC 36533
|| ||||| | || || | ||| ||||| ||||||||||| |||||| || ||||||
Sbjct 521 GTAGTATATCGTGGAGATAACATATCCCGTTTCATCTGCCATTGCTGCTGTATGCCCTGC 462
Query 36534 CCCGCAAAATAGAGCGTTCCCCTGCCCTGCTG---GTTGAGTCTGTCCATCAGTGACATC 36590
|| |||||||| || |||||| | || | | ||| || |||| | | ||||
Sbjct 461 CCGGCAAAATAAAGTGTTCCCTTTCCATCTTTCGCGTTCAGATAATCCAGAACTTTCATC 402
Query 36591 AGCGCCTCGCTGTTCGCGCGCGGCGCGTTCTCGTCAAACAGGTTCAGCTGCGCCACGCCC 36650
| | ||||| |||||||||||||||||||| |||| ||| ||||| ||||| ||
Sbjct 401 AACCTATCGCTACCAGCGCGCGGCGCGTTCTCGTCGAACAAGTTGAGCTGGGCCACACCA 342
Query 36651 TGGCTGAAAAAGTCACCCAGCATAACGCCCGCCTTCTGGTACCGGTGGCCGTCGCGCCAG 36710
||||| || |||||||||||||||| ||| || |||||||| ||||| ||||| ||||
Sbjct 341 TGGCTAAAGAAGTCACCCAGCATAATGCCGGCTTTCTGGTAACGGTGTCCGTCTTTCCAG 282
Query 36711 ACCGCATCAAGGCAGCCCGTCGCCGCGGCGATAATGTCG-CGCGTG--TCCTGTGTGGGC 36767
| || ||||| | | ||| |||| ||||| | |||||| ||||| |||||
Sbjct 281 ATTTTGTCCAGGCA---CTTTACCGTGGCGTTAATGATGTCGCGTGAATCCTGAGTGGGG 225
Query 36768 GTCAGGAGCTTAGTCCCGGCGTGGTTGCCGTAATACGGTTC----AGCAGAGAACGGCGA 36823
|| || ||||| | || ||| || |||||||| || ||| | || || ||
Sbjct 224 GTAAGAAGCTTGATGGACGCACTGTTACCATAATACGGCTCGTTAAGCGCA-AAGGGAGA 166
Query 36824 CGTTTTCACGAACACCGAAATGTACCGGCAGAACTGATGCTCGCCGCGGAGCTTTTCCGC 36883
|||||||||||| | || || ||||||| |||| ||||| || || |||||||| ||
Sbjct 165 GGTTTTCACGAACGCAGAGATAAACCGGCAATACTGGTGCTCACCACGAAGCTTTTCAGC 106
Query 36884 CGCGCGCGCTGCATAGCTGCAGATAGCCTGGCGCATCGCTTCATAGTCAGTGATTCGCTC 36943
| || || |||||||||||||| ||||| |||||| ||||| || |||| || ||
Sbjct 105 ACCACGGGCCGCATAGCTGCAGATGGCCTGACGCATCTGCTCATATTCTGTGACGCGTTC 46
Query 36944 CCCGAATGACCGGCTGCAGACGATTTCCTGTTTTGCCGGGGCAAA 36988
|| || ||||||||||||||||||||||| || || || |||||
Sbjct 45 ACCAAAAGACCGGCTGCAGACGATTTCCTGCTTAGCTGGTGCAAA 1
>seq960
Length=33163
Score = 203 bits (224), Expect = 8e-48
Identities = 703/1077 (65%), Gaps = 35/1077 (3%)
Strand=Plus/Minus
Query 3381 CGCCCGCCCATCACCCGCCCCGACAGATACTGATCCGCCACGCCGATGATATGGCCCGGC 3440
|||||||| ||| ||| || | | | | | |||||||||| ||| | || |||||
Sbjct 13782 CGCCCGCCGATCCGCCGGCCGGCCCGGTCGTTGTCCGCCACGCGGATCACCTGCCCCGGA 13723
Query 3441 AGCGGGATCATGCCTTCCAGCCCAGTGGTGAAACTCAC-CATCCGGTCTTTAGCA--TTT 3497
|| | | || ||||| || | |||||||| | | |||| | || ||
Sbjct 13722 CGCACCAGGGTTCCGTCCAGGCCCACAGAAAAACTCACGCTTTCGGTTTCCAGGCGGTTG 13663
Query 3498 GTCAGCAGCGCCCAGCGGCCGCGGCGGTTGGCCTCGGTACGCCGCGTGCAGCCGATGGCG 3557
|||||||||||||| |||| ||| | ||||| || | ||||||||| |||||
Sbjct 13662 GTCAGCAGCGCCCATTTGCCGATGCGCTGGGCCTGGGCCTGGGAGGTGCAGCCGGTGGCG 13603
Query 3558 GATATCTGCGTCTGGCGCACGCCGTA----GCGCCGCA--CCAGATCAGGCTCCATCACC 3611
| |||| ||||| ||||||| || ||| || || |||| | | | | ||
Sbjct 13602 GTGATCTCGGTCTGCTGCACGCCATAACGGGCGATGCCTTCCGGATC-GTCGACGT-ACT 13545
Query 3612 GCTTCCACTTCATCGGTGTAATGGTTCTCCGGGTTTGACCAGCTCACCATCGCC--GTTG 3669
|| | || | |||| || || | |||||| ||||||||||| ||| | ||
Sbjct 13544 GCACCTTCTGC--CGGTAGAA--GTCCGCCGGGTCGTTCCAGCTCACCAGGGCCACGCTG 13489
Query 3670 AATAACGGTTCTTCT-CGCTGCCGCTGGCGTAGGAGAATTTGCCGTCAATAACGTTGGCG 3728
|| ||| |||| | ||| | || ||||| ||| |||||||| || |||||||||
Sbjct 13488 --TAGCGGGTCTTTTTCGCCGA-GCCACCGTAGACGAACTTGCCGTCGATCACGTTGGCG 13432
Query 3729 CGGGTGTAGACATACGTCATATCGCGCGGCATATCCGCCAGCGCGGCCAGCTGATTACCG 3788
| ||||| ||| | || |||||| || |||| ||| || | ||
Sbjct 13431 TTGCTGTAGGTGTACACCGGGTCTTCCGGCATGTCGGCCACCGCCATCACCGAGCCTGCG 13372
Query 3789 GCCCAGTATGTCATGCCGCGGAAGATGCTCGCCAGGTCGCGCAGCACCGTAAACGCCTCG 3848
|||| || | ||||||||||||| || | |||||||| ||||||| | | ||| |||
Sbjct 13371 CCCCAATAGGCCATGCCGCGGAAGGTGGTGGCCAGGTCCTGCAGCACTTTCAGCGCATCG 13312
Query 3849 TTCTGGCTCTG-GATATACACGTCGCAGAGAAAACGTGGCTCAGTACCGCTGCCGCCGGT 3907
| || | | || ||| | || |||| ||| || ||||| || |||||| |
Sbjct 13311 G-CGCGCACCGAGAGATAGAGGTTGCAGGTAAAGCGCGGCTCGGT------GCCGCCCTT 13259
Query 3908 ACCGTCCGGCACGGGCTGATCGCAGTGCTGCGCGATGCGGTAGAGTTCCCACTTGTCCAC 3967
|| || | ||| ||||| ||||||| ||| |||||||||| || ||||||||||||||
Sbjct 13258 GCCATCGGACACCGGCTGGTCGCAGTACTGGCCGATGCGGTACAGCTCCCACTTGTCCAC 13199
Query 3968 CTGCGTCGCATCCAGCCGGTCTCCGATCCCGAAACGGTCACTTAGCACCAGGTCGTAAAA 4027
||| | || | ||| ||| |||| || |||| | |||| ||||||||| |
Sbjct 13198 CTGGGCGGCGTTGAGCAGGTGCCCGAGGCCATAACGCTGGTGCAGCAGCAGGTCGTAGTA 13139
Query 4028 CACCCATGCGGGATTATTGCTCCAGGCCCATTTAAACGAGCCGTCCCAGGTGCCGGAATA 4087
| ||| || || || | | |||||||| | || || | ||||||||| |||| ||
Sbjct 13138 GATCCAGGCCGGGTTGTCGGTCCAGGCCGACTTGAAGGTGCCGTCCCACACGCCGCTGTA 13079
Query 4088 GGTGCGCGCCACCGGATCGTATGTCGTGGGCACGCGGATTTGCCGCCCGCG-GGCGCGTA 4146
||| || | |||||||||| | | ||||||||||| |||||| | || |
Sbjct 13078 GGTCCGGGTGGCCGGATCGTAGTTGCTTGGCACGCGGATGATCCGCCCTTGCAATTCGAA 13019
Query 4147 CGCTGATTTGCGGAAT--ATTGCTGAACTGCTTCGCGTTGAACGACACAAAGAGCAGCGC 4204
| ||| ||||| | || ||||||| || | |||| || || | |||
Sbjct 13018 GGAGCGGTTG-GGAATCGACTG--GAACTGCGAGGCATCGAACTGCAGGCCGATGATCGC 12962
Query 4205 GGTGTTCGGGTAGCGCAGCTTTGCATCGATGATTTCGGAATACGCTTCGATGTTCGTCGT 4264
| ||||||||||| ||| || ||||| | |||| | || | | | || ||
Sbjct 12961 CGAACCCGGGTAGCGCAACTTGGCGTCGATCACGTCGGTGATGGACTCCACGCTGGTGGT 12902
Query 4265 ATCCACGATGCGGCTGGAGGTGCTGTCCGCCGTCGTCCGGCTCACACGAAGCTGCCAGCC 4324
||| |||| | | | || || ||||||| ||| | ||| || | ||||||
Sbjct 12901 ATCGGCGATCGCCCCGCTGCTGGAGTTCGCCGTCAGCCGCCGCACCCGCACGGTCCAGCC 12842
Query 4325 GGTCCGGGCAGGCGGAAGGTCAATGCGATGGCTGCGCTCATAGAGGGAGGTGGTTTTACC 4384
|| | ||| | || ||||| | || ||| |||||| || | || | | || ||
Sbjct 12841 GGCCTTGGCCGCTGGCAGGTCGACCCGGTGGGAGCGCTCGTACTTGCTGGAGCTCTTGCC 12782
Query 4385 GTCGAACGCGCTGTTCAGCACTGCGACATACCCGCCGCCGTCTGTGGACAGTTCAAT 4441
| ||| || | ||||||| |||| || | |||||||| |||||||| || ||
Sbjct 12781 GCTGAAGGCCGACTGCAGCACTTCGACGAACGCCCCGCCGTCGGTGGACAGCTCGAT 12725
>seq732
Length=81989
Score = 188 bits (208), Expect = 2e-43
Identities = 315/445 (71%), Gaps = 9/445 (2%)
Strand=Plus/Minus
Query 36731 CGCCGCGGCGATAATGTCGCGCGTGTCCTGTGTGGGCGTCAGGAGCTTAGTCCCGGCGTG 36790
||| ||||| |||||||| | || ||||| ||||| |||| ||||| | |||
Sbjct 10130 CGCTGCGGCTATAATGTCCCTGGTATCCTGCGTGGGAGTCATCAGCTTTTCACTGGCCAC 10071
Query 36791 GTTGCCGTAATACGGTTCAG-CA--GAGAACGGCGACGTTTTCACGAACACCGAAATGTA 36847
|| |||||||||||||| || | |||||| ||||||||||| || || | ||| |
Sbjct 10070 ATTCCCGTAATACGGTTCGTTCAACGCGAACGGTGACGTTTTCACAAATACAGCAATATG 10011
Query 36848 CCGGCAGAACTGATGCTCGCCGCGGAGCTTTTCCGCCGCGCGCGCTGCATAGCTG-CAGA 36906
|| ||| |||||| |||||||||| ||||| || || || ||| | || || ||| ||||
Sbjct 10010 CCTGCAAAACTGACGCTCGCCGCGCAGCTTCTCAGCTGCACGCTCGGCGTA-CTGACAGA 9952
Query 36907 TAGCCTGGCGCATCGCTTCATA-GTCAGTGATTCGCTCCCCGAATGACCGGCTGCAGACG 36965
||||| ||||| |||||||| ||| |||| |||||||| || ||||| ||||||||
Sbjct 9951 CTGCCTGCCGCATTGCTTCATACGTC-GTGACACGCTCCCCAAAGGACCGACTGCAGACA 9893
Query 36966 ATTTCCTGTTTTGCCGGGGCAAACTCCTCGATCTCCAGACAGGGCTCGCCGCGCAGCTCG 37025
|| | |||||| | ||| | || || | | | |||| || ||| || ||
Sbjct 9892 ATCTGCTGTTTCGGCGGAGGCGCTTCTTCAAGCGAAATACAGCTTTCTCCGTTGAGTTCC 9833
Query 37026 CGCACGGTGCGCTCCAGCACGACGTTAAAGTGTTTGCGGATAAA-GCGGATGTCGGTATC 37084
|| ||||| | ||||||||| ||||| || | ||| | |||||| | | ||| |
Sbjct 9832 CGGACGGTTCTCTCCAGCACAACGTTGAAATTTTTCCTGATAAATACAGGGTTCGCGCGC 9773
Query 37085 ACAGAGCTGCAGTGCATTTTTAATACTCATTGCCTCCAGCTTTCTGGCAATACGCCGGCC 37144
| ||||||||||| | | || | ||| | | |||||| | | || | || ||
Sbjct 9772 GC-CAGCTGCAGTGCCGTAGTGATGCCCATCGTATTAAGCTTTTTTGAGATCCTGCGACC 9714
Query 37145 GACGCCCCAGACTTCCTCCACCGGC 37169
|| ||||||| ||| |||||||||
Sbjct 9713 TACTCCCCAGATTTCTTCCACCGGC 9689
>seq1047
Length=26254
Score = 168 bits (186), Expect = 2e-37
Identities = 406/599 (68%), Gaps = 29/599 (5%)
Strand=Plus/Plus
Query 36587 CATCAGCGCCTCGCTGTTCGCGCGCGGCG--CGTTCTCGTCAAACAGGTTCAGCTGCGCC 36644
||||||| | |||||| | || |||| ||||| ||| ||||| | ||||||||
Sbjct 17939 CATCAGCTCAGCGCTGTGAGGACGTGGCGGACGTTC--GTCGAACAGCTGCAGCTGCGAA 17996
Query 36645 ACGCCCTGGCTGAAAAAGTCACCCAGCATAACGCCCGCCTTCTGGTACCGGTGGCCGTCG 36704
||||| || | |||||| |||||| || || || || |||||||| || ||
Sbjct 17997 ACGCCGGAGCAGGTGAAGTCATTCAGCATCACACCGGCTTTGGCATACCGGTGCCCATCC 18056
Query 36705 CGCCAGAC-CGCATCAAGGCAGCCC--GTCGCCGCGGCGATAATGTCGCGCGTGTCCTGT 36761
||||| ||| || || |||| || || || || |||||||| || ||||||||
Sbjct 18057 TTCCAGATACGC-TCCAG--AGCCGTTGTAGCGGCCGCAATAATGTCCCGGGTGTCCTGA 18113
Query 36762 GTGGGCGTCAGGAGCTTAGTCCCGGCGTGGTTGCCGTAATACGGTTC---AGCAGAGAAC 36818
||||| || || || || | ||| ||||||||| || || || | | | ||
Sbjct 18114 GTGGGGGTAAGCAGTTTCTCCGTGGCCACGTTGCCGTAGTAAGGCTCTTTAACGGCAAAA 18173
Query 36819 GGCGACGTTTTCACGAACACCGAAATGTACCGGCAGAACTGATGCTCGCCGCGGAGCTTT 36878
|| |||||||| | ||| || ||||| | |||||| |||| |||| || || |||
Sbjct 18174 GGGGACGTTTTAATGAAAACGGAAATATGCCGGCAATACTGGCGCTCTTTACGCAGTTTT 18233
Query 36879 TCCGCCGCGCGCGCTGCATAGCTG-CAGATAGCCTGGCGCATCGCTTCATAGTCAGTGAT 36937
|| | || ||| |||| || ||| |||| |||||| |||| || || || |||||||
Sbjct 18234 TCTGAGGCCCGCTCTGCGTA-CTGACAGACAGCCTGCCGCAACGAATCGTATTCAGTGAC 18292
Query 36938 TCGCTCCCCGAATGACCGGCTGCAGACGATTTCCTG---TTTTGCCGGGGCAAACTCCTC 36994
||| ||||| |||||||||||||| | ||| | ||| |||||| || ||
Sbjct 18293 CTTCTCGCCGAAGCTACGGCTGCAGACGATCTGCTGCTTTGTTGGCGGGGC---TTCTTC 18349
Query 36995 GATCTCCAGACAGGGCTCGCCGCGCAGCTCGCGCACGGTGCGCTCCAGCACGACGTTAAA 37054
| | || ||| || ||| || ||||| || || ||||| || |||||| ||
Sbjct 18350 AAGCGACATGCAGCTTTCCCCGTTCAATTCGCGTACTGTTCGCTCGAGAACGACGGAGAA 18409
Query 37055 GTGTTTGCGGATAAAG--CGGATGTCGGTATCACAG--AGCTGCAGTGCATTTTTAATAC 37110
| ||||||||||||| ||| | ||| ||| | || | || || |||| || |
Sbjct 18410 ATTTTTGCGGATAAAGGCCGGGT-TCG---TCAGGGCCAGATCGAGCGCGGTTTTGATGC 18465
Query 37111 TCATTGCCTCCAGCTTTCTGGCAATACGCCGGCCGACGCCCCAGACTTCCTCCACCGGC 37169
|| | | ||||| | |||||||| || |||||||||| || || ||||||
Sbjct 18466 CCAGAACATTGAGCTTGCGTGCAATACGGTTTCCCACGCCCCAGATCTCTTCGACCGGC 18524
>seq997
Length=29618
Score = 86.0 bits (94), Expect = 2e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 21954 TTCGCATCAGCGAGTTCCTTCGTGTATTTGGCGTCGAGCGCTGCGACATCGCGCTGGCGA 22013
||||||||||| |||| ||||||||||| || ||||| ||| |||| ||||||||
Sbjct 18028 TTCGCATCAGCCGGTTCTCCAGTGTATTTGGCATCCAGCGCAGCGGCATCACGCTGGCGG 18087
Query 22014 GTCTGCATGTCAGTGATGGTGTCTTTAGCC 22043
||||||||||| |||||||| | || |||
Sbjct 18088 GTCTGCATGTCTTTGATGGTGGCGTTGGCC 18117
Score = 82.4 bits (90), Expect = 2e-11
Identities = 232/356 (65%), Gaps = 3/356 (1%)
Strand=Plus/Plus
Query 6560 GGATCGGCAGACGGGTTGCCGTCGGGAAAGGTGCGCGCATCGAGATACTGGCCGAACGTA 6619
||||| || | || || || || || || |||||||||| || || || | || ||
Sbjct 345 GGATCTGCTGTTGGATTTCCATCCGGGAAATTGCGCGCATCCAGGTAATGCGCAAAAGTG 404
Query 6620 TCCAGAACAGTGACCTTTGCCTGTACCATGTCATCAAAGCGCAGGCAGAGCGCGGTCACC 6679
|| ||| || || || ||||| | ||| || ||| || ||| |||||||| || |
Sbjct 405 TCATGAATCGTAACTTTGGCCTGCAGCATATCGTCATAGGCCAGACAGAGCGCAGTGATA 464
Query 6680 ACGCCATCAAGGTTAGCGACGCGCAGCACCGGCTCCGCGCTCTGGCCGTCACTCGACGAC 6739
|| |||| ||| || ||| ||| ||||| ||||| ||| || ||||
Sbjct 465 GAGCTGTCAATGTTGGCAACGGTGAGCGTCGGCTGGGCGCTACTGCCATCGGATGACGCT 524
Query 6740 GCAAGCCCGGTAATTTCAAATGGCCAGGCGCCGTACTCCTCGCCATCAAACCAGATGGAT 6799
| || || | | | |||||||||| || ||||| ||||| | |||||||
Sbjct 525 TCCAGTCCCTCGAGCTTATATGGCCAGGCACCATACTCTTCGCCCTGCCACCAGATACTC 584
Query 6800 TTAGCGGCAAGCTTTAAGGTGTCACCGCCGCTCGCCGCGATTTCTTCCGGCGTATGAGGA 6859
|| || | |||| | ||| || || ||||| || ||||| | ||||| ||
Sbjct 585 TTCGCCTTTAACTTTGATTCGTCGCCACCAGCAGCCGCAATCTCTTCTGCAGTATGCGGG 644
Query 6860 ATGGTGCAGGCGTGAAAGCGCAGCA---CGCCCGCGCCGAACGCCGAGCCGTCGAC 6912
| | | | |||||||||||||| | || || || ||||| || ||||| ||
Sbjct 645 AGGTTATAAGCGTGAAAGCGCAGAACGTCGTCCAGACCAAACGCAGAACCGTCTAC 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124714143064472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |