Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq197 89.7 4e-13
>seq197
Length=620651
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || || ||||| | || || || || |||||| ||| |||| | |||
Sbjct 449564 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCA 449505
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| || ||| |||||||||||| | ||| ||| ||
Sbjct 449504 GACACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 449445
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| | |||||||| |||||||| ||||| ||| || || | || || |||
Sbjct 449444 CAGAGGTTGATCTTTGCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAAC 449385
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762
|| || ||||| || || |||||| ||||
Sbjct 449384 ATCCAGAAAGAGTCCACCCTGCACTTGGT 449356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425395498789926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |