Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_020080.1
Length=174413
Score E
Sequences producing significant alignments: (Bits) Value
seq236 183 3e-41
seq637 136 4e-27
seq962 127 2e-24
>seq236
Length=545527
Score = 183 bits (202), Expect = 3e-41
Identities = 152/186 (82%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 50851 GTGGAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCG 50910
||||||||||| ||||| | ||||||||||| ||||||||||||| || |||| |||
Sbjct 30710 GTGGAAGGTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCG 30769
Query 50911 GTTGAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGT 50970
||||| || || ||||||||||| ||| | || || || || ||||||||||| || ||
Sbjct 30770 GTTGAGCACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGC 30829
Query 50971 TTTAACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCAGAACCTTTACAGAGAGT 51030
|| ||||| |||||||| |||||||| |||||||||||||| | |||||||| || ||
Sbjct 30830 TTCAACTCTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGC 30889
Query 51031 CTATAA 51036
|| |||
Sbjct 30890 CTGTAA 30895
>seq637
Length=122170
Score = 136 bits (150), Expect = 4e-27
Identities = 158/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 50854 GAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCGGTT 50913
|||||||| ||||| | ||||| ||||| || ||| |||| || || |||||| |
Sbjct 107288 GAAGGTGGTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATG 107229
Query 50914 GAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGTTTT 50973
||||||||||| ||||| || ||| | || |||||||| ||||| || ||||| ||||||
Sbjct 107228 GAACATCCTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTT 107169
Query 50974 AACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCAGAACCTTTACAGAGAGTCTA 51033
||||| ||||| |||||||| | ||||||||| || | || || || || |
Sbjct 107168 AACTCCCTGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAGTCCATG 107109
Query 51034 TAATGGCAATTGA-TGATATCAAGGGTTATAA 51064
||| | |||||| ||| |||| | |||| ||
Sbjct 107108 TAAGTGGAATTGACTGAAATCACGCGTTAAAA 107077
>seq962
Length=32987
Score = 127 bits (140), Expect = 2e-24
Identities = 752/1186 (63%), Gaps = 53/1186 (4%)
Strand=Plus/Minus
Query 152156 CAACGAAAACGCAAACAAAGATTCTCGCGTATTCCCGACTAAACGCGATCTTCTGGCGGG 152215
||| |||||||| |||||||| | || |||| || | |||||||| ||||| ||
Sbjct 25741 CAATGAAAACGCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGG 25682
Query 152216 TATCGTTTCTAAACA-TATGGCGCGTAACCATATTCTACCGAAACATATTGTAGAGGCGC 152274
|||||| | ||||| |||| | ||| | || | || ||| || | || ||||
Sbjct 25681 TATCGTCGCCAAACACTATGCC-CGTCAGCACCTGCTGCCGCGCGATGTGGTCTCAGCGC 25623
Query 152275 ATGATTCCGGTGATATTCATTATCACGATCTGGATTACAGCCCGTTCACCCC-ATACACT 152333
| || |||||| || || ||||||||||| || || |||||| ||| || |
Sbjct 25622 ACGAGCGCGGTGAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTTC- 25564
Query 152334 AACTGCTGTCTTGTTGACCTAAAAGGCATGTTAGAAAACGGGTTCCGTATGGGTAACGCT 152393
||||| || ||||||| ||||||||| | ||||||| |||||||||||
Sbjct 25563 AACTGTATGCTGATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGCC 25504
Query 152394 GATATCGAACCGCCTAAATCAATCGGTGTTGCTACTGCTCTTATGGCTCAGATCACCGCA 152453
|| || |||||||| ||||| ||| || ||||| | | ||| ||||| | |||
Sbjct 25503 GAGATTGAACCGCCAAAATCCATCTCCACCGCCACTGCGGTCACGGCACAGATTATCGCC 25444
Query 152454 CAGATTGCTTCTCACCAGTACGGCGGGACAACCTTTGCAAATG--TCGATCAGGTGCTGG 152511
||| | || ||| |||||||| || ||| || || | | || | |||||||
Sbjct 25443 CAGGTCGCCAGCCACATTTACGGCGGCACCACCATT--AACCGCATTGACGAAGTGCTGG 25386
Query 152512 CCCCTTACGTTGAAATGACG-TACAACAAACACTTTAAAGATGCTGTTTGGTACGGGGTT 152570
|||| | | ||| | | | |||||| ||| ||| || | || | |
Sbjct 25385 CCCCGTTTG-TGACCGCAAGCTTCAACAAGCACCGCAAAACGGCCGAAGAGTGGCAGATC 25327
Query 152571 CCTAAATCAAAACAGTATGCG--ATGGAAAAAACAGAAAAGGATGTATTCGATGCGTTCC 152628
|| | | | |||||| | | | ||||| | ||| || |||||||
Sbjct 25326 CCGGACGCCGACGGCTATGCGCACTCGCGCACTGAGAAAGAGTGCTAT--GACGCGTTCC 25269
Query 152629 AGTCATACGAATATGAAGTAAACACCTTACATACTGCAAATGGACAGACGCCTTTTGTCA 152688
|||| || ||||| || || ||| | ||||| || || || |||||||| ||||| |
Sbjct 25268 AGTCGCTGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCCGTTTGTGA 25209
Query 152689 CAATCACTTTCGGTATGGGTACTGGTTGGCGCGAA---CGCATGATCCAGAAAGCGATTC 152745
| || ||| || |||| || | ||| ||| || |||||||| | | || |
Sbjct 25208 CCTTCGGTTTTGGCCTGGGCACCAGCTGG---GAATCGCGTTTGATCCAGCAGTCCATCC 25152
Query 152746 TGAAAAACCGTATTCGTGGACTGGGTAAAAAAGGCATTACCCCTGTATTCCCAAAACTGG 152805
|| |||||||| || || ||||| || ||| || | || ||||| |||||||
Sbjct 25151 TGCGCAACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAAACTGG 25092
Query 152806 TTATGTTTATGGAAAAAGGGATTAACCTTAATCCGGAAGACAGAAACTATGATATTAAGA 152865
| | || | ||| | |||| || | || || || || || ||
Sbjct 25091 TATTCGCCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACATCAAAC 25032
Query 152866 AATTGGCCCTGGAATGTGCTTCAAAGCGTATGTATCCGGATATTATTAGCGCGGCTAATA 152925
| |||| ||||| || || ||||| ||||| ||||||||| | | | | | |
Sbjct 25031 AGCTGGCGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAACTACGATCA-- 24974
Query 152926 ACCGTCGTA----TTACTGGCTCTAGCATTCCTGTATCTCCTATGGGTTGTCGTAGTTTC 152981
|||||| | || || | |||| | | | || |||||||| || || |||
Sbjct 24973 --GGTCGTAAAAGTAACCGGGT----CATT--TAAAACGCCAATGGGTTGCCGCAGCTTC 24922
Query 152982 CTTAGCGTGTGGAATGATGAGCACGGTAATGAAATTCTTGATGGACGTAATAACCTGGGC 153041
|| |||| | | ||||| |||| | | || | || || ||||| ||||| |||
Sbjct 24921 CTCGGCGTATACGAAGATGAAAACGGCGAGCAGATCCACGACGGGCGTAACAACCTCGGC 24862
Query 153042 GTTGTGACAATCAACCTTCCTCGTATTGCGATTGAAGCCGAAGCACAGGAAGATGAAGAC 153101
|| | | | ||||| || || || ||| | || ||| ||| || |||||
Sbjct 24861 GTCATCAGCCTGAACCTGCCGCGCATCGCGCTGGAGGCCAAAG-GCA-----ATGAA--- 24811
Query 153102 GCGCATGATGCATTTTGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTGAA-GCCCT 153160
| || ||| ||| | || |||||||| ||| | ||| || || || ||
Sbjct 24810 ------GCTGAATTCTGGACACTGCTGGATGAACGCCTGCAGCTG-GCGCGCAAGGCGCT 24758
Query 153161 GATGACTCGTATTGATAGTCTCAGAGGTGTTAAAGCCAGTGTAGCCCCGATCCTTTATAC 153220
|||||| ||||| | | || ||| || |||||| | || || || ||||| ||||
Sbjct 24757 GATGACCCGTATCGCCCGCCTTGAAGGGGTAAAAGCCCGCGTGGCGCCTATCCTCTATAT 24698
Query 153221 AGAAGGTGCGTTTGGTGTACGGTTGAAACCCGATGATGAAAT-TCTGGAACTGTTCAAAA 153279
||||| || | || || || ||||| | || ||||| | ||| || | |||||||
Sbjct 24697 GGAAGGGGCCTGCGGCGTGCGCCTGAAAGCGGACGATGACGTCTCT-GAGATCTTCAAAA 24639
Query 153280 ATGGGCGTAGTTCTATCAGTCTGGGATACATCGGATTGCATGAAAC 153325
| || || || || ||||| || ||||| | ||||||||
Sbjct 24638 ACGGCCGCGCGTCGATTTCGCTGGGCTATATCGGCATCCATGAAAC 24593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557981086993520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |