Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_020083.1
Length=157834
Score E
Sequences producing significant alignments: (Bits) Value
seq974 118 1e-21
>seq974
Length=31311
Score = 118 bits (130), Expect = 1e-21
Identities = 243/357 (68%), Gaps = 6/357 (2%)
Strand=Plus/Minus
Query 106056 TCTGCCGACCCCGATCATGGCTGGCGTCCGTACCCGTACCCGTCAGTTCAGCTCCTGTGT 106115
|||||| || || |||||| ||||||| || |||| |||||||||||||||||||| ||
Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301
Query 106116 GCTGATCAAAGTCGGCGACACGCTGGACTCTATCAAGGCCGCAGGCTCTGCTATCGTTGA 106175
|||||| | || |||| ||||| || ||||| ||| | | || ||||| |
Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241
Query 106176 CTATGTCAGCAAGCGCGCAGGCATCGGTCTGGACGTGGGGGAGATTCGTGCCCTCGGTGC 106235
|| || | |||| || || ||||| | ||| || || ||||| || ||
Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAG 181
Query 106236 TCCTATCCGTGGCGGTGAGATGGAGCATACCGGAACTATCCCATTCATCAAGAAGTTC-- 106293
|| || || |||||||| || ||||| |||||| ||| ||| | |||
Sbjct 180 CCCGATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCACTTCCA 121
Query 106294 GTCGGTGACCTGAAGAGCTGCTCTCAGGGTGGGGTTCGCGGCGGCTCTATGACTGCCTAC 106353
| ||| | | || |||||||||||| || || |||||||| || ||| | |
Sbjct 120 GACGGCG--GTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTC 63
Query 106354 TATCCGATGTGGCACCT-GCAGTTCCCAGCCATGATTGTTCTGAAGAATAACCGTGG 106409
|| || ||||||||||| | ||| |||| || | || ||||| || ||||||||
Sbjct 62 TACCCTATGTGGCACCTGGAAGTGGAAAGCC-TGCTGGTCCTGAAAAACAACCGTGG 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504929476702560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |