Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq486 241 2e-58
>seq486
Length=217039
Score = 241 bits (266), Expect = 2e-58
Identities = 1055/1639 (64%), Gaps = 38/1639 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| | |||||||| | |||||||||||||| | ||||| || | | |
Sbjct 176518 CCGCAGCACATGCTGATGCGGGTGTCCATCGGCATCCACGGCGCCGACATCGACGCCGCC 176459
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| || ||| || | | ||| | | ||| |||| ||||| | || ||||| ||
Sbjct 176458 ATCACCACCTACAACCTGCTCTCCGAGAAGTAC-TTCACGCACGCCAGCCCCACCCTGTT 176400
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
| || | || || | || ||| | ||| || ||||| ||||||| ||||| ||
Sbjct 176399 CTCGGCCGCCACCCCCCGCCCTCAGCTCTCCTCATGTTTCCTCATCGCCATGAAGGACGA 176340
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| ||| | |||||||| | ||||| | | ||||||| ||| || || | || ||
Sbjct 176339 CAGCATCGAAGGTATCTACGACACTCTGAAGCAGTGTGCATTAATATCCAAATCCGCGGG 176280
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508
|| || || | || | ||| | ||||| || | | | || ||| ||| ||
Sbjct 176279 CGGCATAGGAGTTCATGTTCATTGCATCAGAGCGAA--AGGCACCTACATCGCGGGCACG 176222
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| || || | || | | || ||||| ||||| | ||| ||| ||||||||
Sbjct 176221 AACGGCGTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGCTAC 176162
Query 75569 GTAAATCAAGCGGGGCGTCG-CAAGGGGTCCA------TCGCGGTCTACTTGGAACCATG 75621
|| | || ||||| | |||| || || |||| |||||| | || || ||
Sbjct 176161 GTGGACCA----GGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTG 176106
Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTC 75680
||| || || || | |||||||| || || | || ||| || | || || | |
Sbjct 176105 GCACGCTGACATATTCGAGTTCCTAGACTTGAAGAAG-AACACGGGCAAAGAGGAAGTGC 176047
Query 75681 GGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740
| |||| || || | | |||||||| |||| || ||||||||| ||||||||
Sbjct 176046 GCGCGCGAGAGCTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTGAGA 175987
Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800
| | | ||| ||| | || || || | || || | | || ||
Sbjct 175986 ACAACGAGGAGTGGAGCCTTATGTGCCCTCACGACAGCCCTGGCTTGGCTGATTGTTGGG 175927
Query 75801 GTGAGGAGTTTGAAGCCCTCTA-CACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859
| || || ||||| || | || || ||| |||||| | || ||||| | |
Sbjct 175926 GAGATGAATTTGATGCATTATATCAGAAA-TATGAACAAGAAGGTAGGTTTGTTAAAAAA 175868
Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
|| | || | || | |||||||||||| | | |||| ||||||||||| ||
Sbjct 175867 GTCCGCGCT-CAAATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACTCC 175809
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
||| ||||||||||| ||||| || |||| ||||| || ||||||||||||||||| ||
Sbjct 175808 ATACATGCTTTACAAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACCAT 175749
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
||| || ||||| |||||||| ||| | ||||||||| | ||||| |||||
Sbjct 175748 CAAATGCAGCAATCTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCTGT 175689
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098
|||||| ||||| ||||| || | | || ||| | ||| | | || | |||
Sbjct 175688 TTGCAACTTGGCGTCAATTGCTGTCAACATGTTTGTAACCGAA---AATAAAACATATGA 175632
Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158
|| ||| ||||| | || | || || || | || | || || ||| | || ||
Sbjct 175631 TTTTGAGAAACTAAAACAAGTGACCAAAATCATAACTGAGAACCTGAACAAGATTATCGA 175572
Query 76159 CAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
|||| |||||||| ||| ||| ||||||||| ||| | ||| ||||||| |
Sbjct 175571 TGTTAATTACTATCCCGTCCCAGA-AGCGAAAAAGTCTAACATGAGGCACCGACCTATCG 175513
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCA 76276
| | || || |||||||| || |||| ||| | ||| ||| || | | | ||
Sbjct 175512 GCATTGGCGTCCAAGGTCTGGCCGATGCTTTTGTATTGATGCGCCTTC-CTTACGAGAGT 175454
Query 76277 GATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAG 76336
|| | |||| || || | ||| | || ||||||||||| ||| | | | | ||
Sbjct 175453 GAAGGAGCCCAGAAGCTCAATCAACAAATATTTGAAACCATCTATTATGGGGCTTTAGAA 175394
Query 76337 GCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCG 76396
|| || |||||| |||| ||| | || ||||| || | || |||| ||| ||
Sbjct 175393 GCTAGCTGTGAACTGGCCGAAAAACTCGGCGTTTATGAAACGTATGCTGGTTGTCCGGCC 175334
Query 76397 TCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACT 76454
|||| | | || | ||| ||||||| | || ||| | | | | | ||||
Sbjct 175333 AGTGAAGGAATATTGCAATATGAAATGTGGGGA-AAGACACCCA-CAGACCTGTGGGACT 175276
Query 76455 GGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 76514
|| || ||| ||| | ||| | | | || || || ||| ||| ||| |||| |
Sbjct 175275 GGAGTGCTCTGAAGCAGAAGATCGCGAAACATGGCCTGCGGAACTCTCTGTTGCTGGCCC 175216
Query 76515 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACA 76574
| ||||| || |||||||| ||||| || | || || ||||||| ||||| |||| ||
Sbjct 175215 CCATGCCCACCGCCTCCACTGCACAGATTCTTGGCAACAATGAATCATTTGAGCCATTCA 175156
Query 76575 CAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACC 76634
| ||||||| |||| |||||| || | || || || | |||||| | ||||
Sbjct 175155 CTTCAAACATTTACCAAAGAAGAGTTCTTTCTGGAGAATTCCAGGTGGTCAACCATCACC 175096
Query 76635 TCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 76694
| | || |||| || || | | ||| | |||||||| ||||||| |
Sbjct 175095 TGCTTCGCGATCTCACCGAGGCTGATTTATGGGATGATGATATGAAAAATCTCATTATAC 175036
Query 76695 AAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA-ATCTCTAC 76753
| ||| |||||||| ||| | ||| || | || || |||| |||| |||
Sbjct 175035 ACAACAATGGATCCATTCAGTCTATTGAAAGTATTCCCAAAGAAAT-AAGAGATCTTTAC 174977
Query 76754 CGCACAGTGTGGGAAATCAAGATGAAAGATGTC-ATTGACATGGCCGCAGATCGTGGTCG 76812
|| |||||||| || || |||| | || | |||||||| |||||||||
Sbjct 174976 AAGACTGTGTGGGAGATATCTGTG-AAGACCACAATCCAAATGGCCGCGGATCGTGGTGC 174918
Query 76813 CTTCATTGATCAAAGTCAA 76831
|||||||| || ||||||
Sbjct 174917 TTTCATTGACCAGAGTCAA 174899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596556221926720
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