Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021073.1
Length=107218
Score E
Sequences producing significant alignments: (Bits) Value
seq974 230 2e-55
seq962 105 5e-18
>seq974
Length=31311
Score = 230 bits (254), Expect = 2e-55
Identities = 269/361 (75%), Gaps = 2/361 (1%)
Strand=Plus/Minus
Query 9245 ATCTCCCTCCCGACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCA 9304
|| || || || || |||||||||||||| || || || || ||||| || ||||||||
Sbjct 365 ATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCC 306
Query 9305 TGCGTAAAAATCGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATC 9364
|||||| ||||| | ||||| ||||| | || ||||| || || || |||| |||
Sbjct 305 TGCGTACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATC 246
Query 9365 GTGAGTTACGTTTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTA 9424
|||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || |
Sbjct 245 GTGAAATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTG 186
Query 9425 GGTTCTGAGATTCGTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTCTACAAACAC 9484
|| |||||| || |||||||| | || || || |||||||| ||||| || |||
Sbjct 185 GGCAGCCCGATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCAC 126
Query 9485 TTCCAAACAGCAGTGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTA 9544
||||| || || || |||| || || ||||| || || ||||| || || || |
Sbjct 125 TTCCAGACGGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTG 66
Query 9545 TTCTACCCAATGTGGCACCTAG-AGTACAAATCACTAATCGTACTCAAGAACAACCGTGG 9603
|||||||| ||||||||||| | ||| ||| | || | || || || |||||||||||
Sbjct 65 TTCTACCCTATGTGGCACCTGGAAGTGGAAAGC-CTGCTGGTCCTGAAAAACAACCGTGG 7
Query 9604 T 9604
|
Sbjct 6 T 6
>seq962
Length=32987
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 6202 TCGCCGTTCTACCCGATGTTCAACTGCTGTTTGGTCGATCTTAAAGGTATGTTGGCGAAT 6261
|| ||||||| ||||||||||||||| || | || || ||||| ||| || | |
Sbjct 25584 TCACCGTTCTTCCCGATGTTCAACTGTATGCTGATTGACCTGAAAGGCATGCTGACCCAC 25525
Query 6262 GGGTTTATGATGGGTAACGCAGACATCGAAACCCCTAAGTCAATCTCAACTGCGTGTGCT 6321
||||||| ||||||||||| || || ||| | || || || ||||| || || |||
Sbjct 25524 GGGTTTAAAATGGGTAACGCCGAGATTGAACCGCCAAAATCCATCTCCACCGCCACTGCG 25465
Query 6322 ATCACTGCACAAATTATCGCTCAGGTTGCGTGCCACCAATACGGTGGGGTTAGCCTCAAT 6381
|||| ||||| |||||||| ||||| || ||||| ||||| || | | | ||
Sbjct 25464 GTCACGGCACAGATTATCGCCCAGGTCGCCAGCCACATTTACGGCGGCACCACCATTAAC 25405
Query 6382 CGTCTTGATGAGGTGTTGGCACC 6404
|| |||| || ||| |||| ||
Sbjct 25404 CGCATTGACGAAGTGCTGGCCCC 25382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 342965301114086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |