Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq997 518 1e-142
seq983 242 1e-59
seq1547 205 3e-48
seq1127 100 8e-17
>seq997
Length=29618
Score = 518 bits (574), Expect = 1e-142
Identities = 454/562 (81%), Gaps = 5/562 (1%)
Strand=Plus/Minus
Query 43026 CTGCAGCGCTGGACTTATGCTGGCGGCAAGCAGTGGAAGGGGCTGA-TCACCCGGCGCGA 43084
|||| |||||||||| ||||||| ||||| |||||||| ||| ||| | || || || ||
Sbjct 18346 CTGCGGCGCTGGACTCATGCTGGAGGCAAACAGTGGAAAGGG-TGAGTAACGCGCCGGGA 18288
Query 43085 GATTGAGCGTGAAGTCTGCGAGTGGGGCCAGAAATGAGCCGATTAACCGCAATCATCTGC 43144
|| |||||| ||| ||||| ||||| ||| |||||||| |||||||||| |||||||||
Sbjct 18287 GAATGAGCGCGAATTCTGCATGTGGGACCATAAATGAGCTGATTAACCGCGATCATCTGC 18228
Query 43145 GCTGTCGTTATCTGCCTGCTGGTTTCCATGGCCTGGGCCATTAACCACTACCGCGACAAC 43204
||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||
Sbjct 18227 GCTGTCGTTATCTGCCTGCTGGTCTTTATGGCTTGGGCGATTAACCACTATCGCGACAAC 18168
Query 43205 GCCATCACCTACAAAGACCAGCGCGACAAAGCCACCAAAAGTCTCCGCCTGGCTAACGAC 43264
||||||||||||||||| |||||||| |||||||| | | ||| ||| ||| |||| |
Sbjct 18167 GCCATCACCTACAAAGAGCAGCGCGATAAAGCCACTGAGAAACTCAGCCAGGCCAACGCC 18108
Query 43265 ACCATCAAAGACATGCAGACCCGTCAGCGTGATGTCGCTGCACTGGATGCCAAATACACC 43324
||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct 18107 ACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCTGCGCTGGATGCCAAATACACT 18048
Query 43325 GGAGAACTGGCTGATGCGAAAGAAACCATTGAGCGTCTGCATAGCGATGTCATTGCTGGC 43384
||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 18047 GGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTGCATAGCGATGTCATTGCTGGC 17988
Query 43385 CGTAAGCGGCTGCAAGTCGCCGCCACCTGT---GCAAAGTCAACGACCGGAGCCAGCAGC 43441
|||||||||||||| || ||| | |||| || || | ||||||| || || ||
Sbjct 17987 CGTAAGCGGCTGCAGCTCAACGCAAACTGTCCCGCGAACGGAGCGACCGGCACCGGCGGC 17928
Query 43442 ATGGGCGATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAATTATTACCGTCTC 43501
|||||||||| |||| |||||||| | ||||||| |||||| | |||
Sbjct 17927 ATGGGCGATGCTTCCGGCCCCAGACTTACTGACTCCGCTGAACGGGATTATTTCATCCTC 17868
Query 43502 CGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAATACATCAGGACG 43561
||| |||||| || | || |||||| ||| |||||| | ||||| || ||
Sbjct 17867 AGAAAGCGAATCGTCACAGTGACGAAGCAGGTCGGCTATCTGCAGAACTACATAAGCACT 17808
Query 43562 CAATGCCTGAAATAAttttttt 43583
|| ||| | |||||| |||||
Sbjct 17807 CAGTGCTTAAAATAAAGTTTTT 17786
Score = 214 bits (236), Expect = 5e-51
Identities = 228/296 (77%), Gaps = 4/296 (1%)
Strand=Plus/Minus
Query 42130 AAAAAACGCGGAGAACGACATCACCCCTCTCCGCAATAACGACTCAATCTCATACCCGCT 42189
||||| |||||||||||||||| | |||||||| ||| | | | | ||||||||
Sbjct 21524 AAAAAGTGCGGAGAACGACATCAATCTTCTCCGCATTAATAATGCCAGTGC-TACCCGCT 21466
Query 42190 TGTCTTTCTTTTATCCACAAAGAGGTAAAGCCAT-AACTTAGTGGAAATGGTAACAGCTA 42248
||| | |||| ||||| | | |||| ||| | |||||| | ||||| ||||| ||
Sbjct 21465 TGTATCTCTTATATCC-CTATGAGGATAAGTTTTTAACTTAACGCAAATGATAACATTTA 21407
Query 42249 AAAACTATTTGAAAAGCTAATTATTTTTT-GCATCAACTGGCTATTCTTAAGGATTGTTT 42307
|||||||| |||| || ||||| |||| || | || | | | |||||||||||| |||
Sbjct 21406 AAAACTATGTGAATAGTTAATTGTTTTAAAGCTTTAAATAGTTCTTCTTAAGGATTATTT 21347
Query 42308 AATTTTTTGCTTTCCTAGCGAGAAAGAAGCTCCGGAAACTATCAATCAATACAAGGCTGC 42367
|||||||||| ||||| |||| |||||||| | | | | || | ||||||||||
Sbjct 21346 AATTTTTTGCATTCCTCAGAAGAAGGAAGCTCCAGCAGGTTTTAACCCTCACAAGGCTGC 21287
Query 42368 CGTTCGGCGGCCTTTTTTATTCCTAGCAACAGCACTCGCACAAAGCGAGGTGAGAG 42423
|||| |||||||||||||||| || |||| ||||| ||||||||||||||||||||
Sbjct 21286 CGTTTGGCGGCCTTTTTTATTTCTTGCAATAGCACCCGCACAAAGCGAGGTGAGAG 21231
>seq983
Length=30748
Score = 242 bits (268), Expect = 1e-59
Identities = 247/322 (77%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 23432 ACGCAGTTAAAGTGGCGGGCATACTCTTCAAGGCTGGTGATACCCAACCGCACCCATTTA 23491
|||||||| ||||| |||||||||||||||||||||||||| || | |||||||||||
Sbjct 9108 ACGCAGTTGAAGTGTCGGGCATACTCTTCAAGGCTGGTGATGCCAAGGCGCACCCATTTT 9167
Query 23492 GGATGCGACCATTGCGGCAGACCGATGTAAATCATAACGCGTGAAGGATCTCTTCCACGC 23551
|| |||||||| || || | ||||| || |||||| |||| | ||||| ||| ||
Sbjct 9168 GGGTGCGACCACTGGGGTAAACCGACATACATCATAGCGCGCTGACAATCTCATCCGTGC 9227
Query 23552 TACGCACACGGGCGATGCGCGGGTAGATATGATTAATGCTGTTATTGTGTTGCTCGGCGC 23611
| ||||| ||| ||||||||||| |||| || | |||||| | ||| || || |||
Sbjct 9228 TGCGCACGCGGCCGATGCGCGGGAAGATGTGGGTCATGCTGCCCTGGTGCTGTTCCGCGG 9287
Query 23612 TGGCGGCACTACAGGCGTCTTCGGCAATCACCAGATTAAAGCCAAGTTCCCAGGCATTGC 23671
||| || || ||||| |||||||| |||||||||||||| || || ||||| || ||||
Sbjct 9288 AGGCCGCGCTGCAGGCATCTTCGGCGATCACCAGATTAAAACCGAGCTCCCACGCGTTGC 9347
Query 23672 GGGCGGTGGATTCAACACCGATATTGGTCGAGATCCCACATAACACAATTGTATCGATAC 23731
|||| || || || || ||||| ||||| || || || || | | ||| || || || |
Sbjct 9348 GGGCAGTCGACTCCACGCCGATGTTGGTGGAAATACCGCACAGGATAATGGTGTCAATGC 9407
Query 23732 CTCGGCGGCGTAACCGCACCTC 23753
| || ||||| | | ||| |||
Sbjct 9408 CGCGACGGCGGAGCTGCAGCTC 9429
>seq1547
Length=4346
Score = 205 bits (226), Expect = 3e-48
Identities = 289/400 (72%), Gaps = 7/400 (2%)
Strand=Plus/Minus
Query 21185 GATTGATCGTTTTGGGCGATCAATAACTGAT--AATTGATCTATCAAACCAATTATACCC 21242
||||||||||||| ||||||||| || || |||||||||| || |||||||| ||
Sbjct 596 GATTGATCGTTTTCAGCGATCAAT--CTTATGAAATTGATCTACAGAATCAATTATATCC 539
Query 21243 ACCTCTTTCATGTTGGTATTGTCTAAGTTCATGAATACCTCTGG-ATACTATCAAAATGA 21301
| ||||| ||| |||||| ||| || ||||| | ||||| ||| | || ||||
Sbjct 538 CTTTGATTCATCTTGTTATTGTTTAACCTCTTGAAT-CTTCTGGGATATAACCACTATGA 480
Query 21302 GAAAACTGATTATCTGCATGGCAGGCGCTGTCATGCTTACAGGATGCGCTGGCGTAATTG 21361
| | ||||| | ||| |||| | |||| |||| | || ||||||||||| ||
Sbjct 479 AATACATGATTCTTTGCCTGGCGGTGGCTGCATTGCTCTCTGGTTGCGCTGGCGTTCTTC 420
Query 21362 AGAAACAGGAACCAGTTTGCAGCGGCACTGCAATCGTTGGCGGTCAGGAAACTACGGTTC 21421
|||| ||| | || | || | ||| || || | | ||||| ||||| | | || |
Sbjct 419 AGAAGCAGCATCCCATATGTACCGGAACGGCCCTGATCGGCGGACAGGAGAACATCGTCC 360
Query 21422 AGATTTACGGTGTGCGTAAACAAAACAACCAGACGCAGTACCGGGCTGGATATCCTTTCA 21481
|||||||||| ||||| || |||| || ||||| |||||||| || || || || || |
Sbjct 359 AGATTTACGGAGTGCGGAAGCAAAGTAATCAGACCCAGTACCGCGCCGGTTACCCATTTA 300
Query 21482 GCTGGCGCTGGGTAAGTGCGAATACATTTACCGAAACAACCTGCAAATAACCCACTACGC 21541
|||| ||||| ||||| || || || | | || |||||| |||| | || | |
Sbjct 299 ACTGGAATTGGGTTAGTGCCAACACGTTCATCAGCACCACCTGCCAATAGCTCATTCTGT 240
Query 21542 TTAAACATAAACCTCGCTCCGGCGGGGtttttttATTGCC 21581
|| || | ||||||||||||||||||| ||||||||||||
Sbjct 239 TTCAAAACAAACCTCGCTCCGGCGGGG-TTTTTTATTGCC 201
Score = 156 bits (172), Expect = 1e-33
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 19981 TTCATCCAGGACGGCACTATCAGCAACGCAAAGATTGGTAATTTTATCCAGTCGAACAAT 20040
|| || ||||| ||||| |||| ||| || || || || | || |||||||| || ||
Sbjct 1846 TTTATTCAGGATGGCACGATCACCAATGCCAAAATCGGCGACTTCATCCAGTCCAATAAC 1787
Query 20041 TATGTTGCTGGTTCTGCTGGCTGGAAGCTTGATAAAGGGGGGACGTTTGAGAACTACGGT 20100
|| |||||||| |||| || |||| ||| |||||| || || || ||||||||||||
Sbjct 1786 TACGTTGCTGGGTCTGTCGGATGGAGGCTGGATAAATCAGGAACATTCGAGAACTACGGT 1727
Query 20101 TCGACTGCTGGTGAGGGAGCCATGAAACTGACAAATCAGACGATCAGCGTCAAAGATGGC 20160
||||| | ||| |||||||||||||||| |||||| ||||| ||||| || || | |
Sbjct 1726 TCGACAGTTGGAGAGGGAGCCATGAAACAGACAAACCAGACAATCAGTGTGCGTGACGCC 1667
Query 20161 AGTAATGTTCTTAGGGTGCAGGTTGGCCGATTAACGGGA 20199
| ||||| | ||||||||| | || || | ||||||
Sbjct 1666 AACAATGTGTTGAGGGTGCAGATCGGGAGAATCACGGGA 1628
>seq1127
Length=20158
Score = 100 bits (110), Expect = 8e-17
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 23066 GGAAAGATCCGGTGCACTCGCTTTGTTAACTCATTCAGAATTATTTCTCTGGCACCTGTT 23125
||||| ||| |||||||||||||||||| |||| ||| || || |||||||| |||
Sbjct 7808 GGAAAAATCTGGTGCACTCGCTTTGTTAGCTCAGCCAGGATGATCTCTCTGGCCCCTTGG 7867
Query 23126 AATCCTTCAACATTCCGTTTGTCGTACACCAACTCAACGAACATACCG 23173
| ||||||||||| || ||||| || |||| ||||| |||||||||
Sbjct 7868 AGCCCTTCAACATTTCGCTTGTCATAAACCAGTTCAACAAACATACCG 7915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147555256452736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |