Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq718 111 5e-20 >seq718 Length=85064 Score = 111 bits (122), Expect = 5e-20 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 40502 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40561 |||||||| ||||| ||||||||||| || || || ||||| ||||| || ||||| | Sbjct 5216 GAAGTCGACGTCGAAGTCGGGCATGGAAACACGTTCCGGGTTGAGGAAACGTTCGAACAG 5275 Query 40562 GAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40621 || || |||||||| ||||||||||| || | | || || |||||||| || Sbjct 5276 CAGGTCGAATTCCAGCGGATCGAGGTCGGTAATTTTTAATGCATACGCCACCAGCGAGCC 5335 Query 40622 GGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAA 40681 || | ||||| || || || || ||| |||||||| ||||||| ||| | ||||| Sbjct 5336 CGCACCGGAGCCACGGCCCGGACCTACCGGTACGCCGTTATCCTTCGACCACTGAATGAA 5395 Query 40682 GTCC 40685 ||| Sbjct 5396 CTCC 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163881308639192