Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq236 149 2e-30
seq190 89.7 2e-12
>seq236
Length=545527
Score = 149 bits (164), Expect = 2e-30
Identities = 200/273 (73%), Gaps = 8/273 (3%)
Strand=Plus/Plus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| |||||| ||||||||||| || || |||||| | |||||| ||||| |||
Sbjct 327999 TCCATAGCCTTGATCAAACGACGCTGGATGTACCCAGTTTCGGCTGTTTTGACAGCAGTA 328058
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693
|| || ||||| | || || |||||||| |||||| | | |||| ||| ||| || ||
Sbjct 328059 TCGATAAGACCTTCTCGTCCTCCCATAGCGTGGAAGTAGAACTCTGACGG-CGTGAGACC 328117
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750
| | | ||| |||| ||||| || | || ||| || || ||||||| |||| |
Sbjct 328118 GGCGAGGTACGAGTTCTCGACGAACCCTCTCGACTCAGGACCGTAATCGTC---CTTGAT 328174
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| |||| |||||| || | | ||| | || || |||||||| |||||||| ||
Sbjct 328175 GAAGTGGGGCAAGGTCCTCTTACGAAAACCGAAAGGAATTCGCTTTCCTTCAACGTTTTG 328234
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||| | || | ||| | ||| ||||| ||
Sbjct 328235 CTGTCCTACACAAGCAATAACCTGAGAAATGTT 328267
>seq190
Length=632835
Score = 89.7 bits (98), Expect = 2e-12
Identities = 110/149 (74%), Gaps = 1/149 (1%)
Strand=Plus/Minus
Query 252550 TTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGA 252609
|| |||| || | ||| | || ||||| ||||||||||| ||||| |||||||||||
Sbjct 369354 TTGGTAATGTAGACACCCATAGCTTGCTTACCCATAGCACTTTGGTAGGTATTTCTGGGG 369295
Query 252610 GACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACAACACCGAAGATAGTGCTTGGG 252669
||| |||| || ||||| ||||| ||||| |||||| || || | |||
Sbjct 369294 CTCTGGTTGTGATCAGGGAATGGAATAATGGATGCACAAACACCCAATATCATAGCTGGA 369235
Query 252670 TGAATTTCACAGTGACTGTAA-TGATACA 252697
||||| ||||||||| ||||| || ||||
Sbjct 369234 TGAATCTCACAGTGAGTGTAAGTGGTACA 369206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471783769352578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |