Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021343.1
Length=35430
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 246 7e-61
>seq1001
Length=29257
Score = 246 bits (272), Expect = 7e-61
Identities = 781/1200 (65%), Gaps = 83/1200 (7%)
Strand=Plus/Plus
Query 25509 GACTATCACCACGGCGTAACCGTCGTCGAAGATAACACCGGCGTCCGTCCGATCACCACG 25568
|||||||| |||||||| ||| |||| |||| ||| || | || ||||
Sbjct 6704 GACTATCATCACGGCGTCGAGGTCATCGAGATTAACGATGGCACGCGCACCATTTCCACC 6763
Query 25569 ATCTCGACGGCCGTTATCGGTGTCGTCTGTACCGGCGACGATGCCGACCCGATCACGTTC 25628
| ||||||||| | ||||| | ||||| || | | |||||| ||| | | || |||
Sbjct 6764 GTTTCGACGGCCATCATCGGCATGGTCTGCACGGCCAGCGATGCTGACGCAAAGACATTC 6823
Query 25629 CCGCTGAACAAGCCGGTGCTGCTCACGAACGTGCAGGCCGCGCTCGGCAAGGCGGGCCGA 25688
|| | ||| ||||||| ||| | | | |||||| | || |||| || || || |
Sbjct 6824 CCCTTAAACGAGCCGGTACTGATTAACAGCGTGCAAACGGCTATCGGTAAAGCCGGTAAA 6883
Query 25689 AAGGGCACGCTGTACACGACGCTCGATGCGATCCAGAAACAGGCCCGCCCGTACACCGTC 25748
|| ||||||||| | | || | || ||| | ||| | ||| || ||
Sbjct 6884 AAAGGCACGCTGGCAAAATCCCTGCAGGCCATCGCCGACCAGTGCAAACCGGTCATTGTG 6943
Query 25749 GTGGTGCGCGTCCCGCAAGG------------------CAAGGATTCGGCG------GAA 25784
||||||||||| || |||| | ||| ||||| |||
Sbjct 6944 GTGGTGCGCGTTCCAGAAGGTGTCGACGACCCGGCAGACCCGGAAGCGGCGCAGAAAGAA 7003
Query 25785 ACCACGTCGAACATTGTCGGCACCGTGAATGCCGA---CGGCACGAAAACCGGGCTCAAG 25841
|||| || ||||| ||||||| || | ||| ||||| | |||||||| ||
Sbjct 7004 ACCATTTCCAACATCATCGGCAC---GACCGACGAAAACGGCAAATACACCGGGCTGAAA 7060
Query 25842 GCGCTCGAATCGGCG----CCGTCCGTGGTGCAGGTGAAGCCGCGGATTCTGGCGGTTCC 25897
||||| | ||||| ||||| || | | |||||||| ||||| | || ||
Sbjct 7061 GCGCTGTTAACGGCGAAAACCGTCACCGGCG----TTAAGCCGCGCATTCTCGGCGTGCC 7116
Query 25898 GGGGCTCGATACGCAGCCCGTCGCGAACGCGCTGGCATCCACCGGGCAACTGCTGCGTGC 25957
|||||| ||||||||| || |||| |||||| || || ||| | || ||||| ||
Sbjct 7117 GGGGCTGGATACGCAGGAAGTGGCGACCGCGCTTGCGTCAACCTGCCAGAGCCTGCGCGC 7176
Query 25958 GATGGCGTACGT---CGCGGCTCGCAACGAGACGGGGGAACTGGTCGCCACGCAGGAAGA 26014
| | | ||||| |||| || | |||| | | || | |||| | |
Sbjct 7177 GTTCGGCTACGTAAGCGCGTGGGGCTGCAAGACC-----ATT--TC-CGACGCCATCAAA 7228
Query 26015 GGCGGTGGCCTACCGGAAGAAGTTCGGTCAACGCGAAGTGATGGTGATCTGGCCGGATTT 26074
||||| |||| ||| | || ||||| ||||||| || || || ||
Sbjct 7229 ----------TACCGTGAGAATTTCAGCCAGCGCGAGCTGATGGTCATTCACCCTGACTT 7278
Query 26075 CGTCGCATGGGACGACGCCGCGT-CGAAA--GAGGTTGAA---GTGCCCGCCGTAGCGTA 26128
| ||||||||| | | ||| ||||| || ||| | | | ||||| |||
Sbjct 7279 TCTGGCATGGGACACCACGGCGAACGAAACCGATATTGCATGGGCGACCGCCC--GCG-- 7334
Query 26129 TGCGGTCGGCCTGCGCGCGAAGATCGATCAACAAACCGGCTGGCATAAGACGCTCTCGAA 26188
|| ||||||||||||| || ||||| || | ||||| ||||| || ||||| || ||
Sbjct 7335 --CGCTCGGCCTGCGCGCCAAAATCGACCAGGAGACCGGATGGCACAAAACGCTGTCTAA 7392
Query 26189 CGTCGCTGTGAATGGCGTCGAAGGGATCAGCAAGCCGGTTTCGTGGGATTTGCAGAACCC 26248
||| | |||||||||||| || ||||| |||| || |||||||||||| | |
Sbjct 7393 CGTTGGCGTGAATGGCGTCACCGGCGTCAGCGCCTCGGTCTCATGGGATTTGCAGGAGCA 7452
Query 26249 GGCGACCGATGCGGGTTTCCTCAACGAGAATCAGGTCACGACGCTGATCAACCGGAACGG 26308
||| ||||| || | || || || ||| || ||||| ||| | ||||
Sbjct 7453 GGCTACCGACGCCAACCTGCTGAATCAGGCCGGGGTGACAACGCTAATCCGCAACGACGG 7512
Query 26309 CTTCCGATTCTGGGGCTCGCGCACGGCGTCCGACGATCCGCTGTTCGCGTTCGAAAACTA 26368
||| ||||||||| || || || |||||||| | |||| ||| ||||||||
Sbjct 7513 CTTTAAGTTCTGGGGCAACCGTACCTGCTCGGACGATCCTTTATTCGTGTTTGAAAACTA 7572
Query 26369 CACGCGCACGGCGCAGGTGCTGGCCGATACGATGGCCGAAGCACAGA--TGGTCGTTATC 26426
||| ||||||||||||||||||||||| |||||||| || || || ||| || ||
Sbjct 7573 CACCCGCACGGCGCAGGTGCTGGCCGACACGATGGCGGAGGCGCACGCGTGGGCG--ATG 7630
Query 26427 GACG-GCGCGATGATTCCGG--CGCTACCGCGCGACGTGATCGAGGGCATCAACGCAAAA 26483
||| || || | |||| |||| |||||| | ||| || ||||| || |||
Sbjct 7631 GACAAGCCCGTT---TCCGCAACGCTTATCCGCGACATTGTCGCCGGTATCAATGCCAAA 7687
Query 26484 ATGCGTGAAATGAAAACCAAGGGCCAGTTGATCGGCGGCTCGGCGTGGTTCGACGCGGAA 26543
| || || |||||| || ||| | | | | ||| || |||| |||| ||||
Sbjct 7688 TTCCGCGAGCTGAAAAATAACGGCTATATCGTTGACGGGTCATGCTGGTACGACCCGGAG 7747
Query 26544 CAGAACGGCGTTGTGGCGCTGAAAGATGGCAAAGCGGTG-ATCAATTACGACTACACGCC 26602
||| ||| | | ||||||| || || || || ||| ||||||||||||| ||
Sbjct 7748 TCAAACACCGTGGAAACCCTGAAAGCCGGGAA-GCTGTATATCGATTACGACTACACCCC 7806
Query 26603 GGTGCCCCCGCTGGAAAACCTCACGCTGCGCCAGAAGATCACCGACCAGTATCTGGCCGA 26662
|| || |||||||||||||| || ||||||||| |||||||| |||||||| ||
Sbjct 7807 CGTCCCGCCGCTGGAAAACCTGACCCTGCGCCAGCGCATCACCGATACCTATCTGGCTGA 7866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113251987256576
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