Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021344.2
Length=176227
Score E
Sequences producing significant alignments: (Bits) Value
seq962 266 4e-66
seq974 187 3e-42
>seq962
Length=32987
Score = 266 bits (294), Expect = 4e-66
Identities = 851/1300 (65%), Gaps = 55/1300 (4%)
Strand=Plus/Minus
Query 152160 GCCCGTTCATACATTGAGTATCGCCACGATCGCGACATTGCCCGTGAACAGAAAAGCAAG 152219
||||| | ||||||||||| ||||||||||| ||| | |||||| || |
Sbjct 25851 GCCCGCGCCTACATTGAGTACCGCCACGATCGTGACGTGCAGCGTGAAAAGCGCGGTCGC 25792
Query 152220 CTGTTCTCTGATATCTCCGGCATGGTGAACCTGTCCAACAAAGAGATCACCAACGAGAAC 152279
||| | || ||| ||| |||| | | | ||||| | | ||| || |||
Sbjct 25791 CTGAACCAGGAGATCCGTGGCCTGGTAGAGCAGACCAACTCTGCCCTGCTCAATGAAAAC 25732
Query 152280 GCGAACAAAGATGCAAGGGTATTCCCGACACAGCGCGATTTGCTGGCGGGTATCGTAGCG 152339
|| |||||||| | || |||| || ||||||||| ||||||| |||||||| ||
Sbjct 25731 GCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGGTATCGTCGCC 25672
Query 152340 AAGCATTTCGCCCGTAATCATATCCTCCCGAAACATATCGTAGAAGCGCATGATTCCGGT 152399
|| || | |||||| | || | || ||| || | || |||||| || ||||
Sbjct 25671 AAACACTATGCCCGTCAGCACCTGCTGCCGCGCGATGTGGTCTCAGCGCACGAGCGCGGT 25612
Query 152400 GACATCCACTATCACGATCTGGACTATAGCCCGTTCACCCCTTACACTAACTGCTGTCTG 152459
|| ||||||||||||||||| |||||| |||||| ||| ||||| |||
Sbjct 25611 GAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAACTGTATGCTG 25552
Query 152460 GTTGACCTGAAAGGTATGCTGGAGAACGGTTTTAAAATGGGTAACGCGGACATTGAACCG 152519
||||||||||||| |||||| |||| ||||||||||||||||| || |||||||||
Sbjct 25551 ATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGCCGAGATTGAACCG 25492
Query 152520 CCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCACAGATTGCCTCT 152579
|| ||||| ||| || || || ||| ||| ||||| | ||| ||| | |||
Sbjct 25491 CCAAAATCCATCTCCACCGCCACTGCGGTCACGGCACAGATTATCGCCCAGGTCGCCAGC 25432
Query 152580 CACCAGTACGGCGGGACAACCTTTGCGAACGTGGATAAAGTGCTGGCTCCATACGT---C 152636
||| |||||||| || ||| || | | || |||||||||| || | || |
Sbjct 25431 CACATTTACGGCGGCACCACCATTAACCGCATTGACGAAGTGCTGGCCCCGTTTGTGACC 25372
Query 152637 GAAATGACATTCTTCAAACATCTGCACGA-TGCTGAACATTACGGTATCGAACACTATAA 152695
| | | ||| ||| || | ||| | || ||| | | || | || | | |
Sbjct 25371 GCA---AGCTTCAACAAGCA-CCGCAAAACGGCCGAAGAGT--GGCA--GATCCC--GGA 25322
Query 152696 TGATTATGTGTATGCGATTGAAAAGACTGAAAAAGATGTG-TATGATGCGTTCCAGTCCT 152754
| | | |||||| ||||| ||||| ||| ||||| |||||||||||
Sbjct 25321 CGCCGACGGCTATGCGCACTCGCGCACTGAGAAAGA-GTGCTATGACGCGTTCCAGTCGC 25263
Query 152755 ATGAGTATGAAGTAAACACCCTACATACTGCCAACGGACAAACCCCGTTTGTTACCATCA 152814
|||||||| || || ||||| ||||| |||||||| || || |||||||| ||| ||
Sbjct 25262 TGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCCGTTTGTGACCTTCG 25203
Query 152815 CTTTCGGTACTGGTACGAGCGATTATGAA---CGCATGATCCAGAAAGCGATCCTGAAAA 152871
||| || || || ||| | ||| || |||||||| | | |||||| |
Sbjct 25202 GTTTTGGCCTGGGCACCAGC---TGGGAATCGCGTTTGATCCAGCAGTCCATCCTGCGCA 25146
Query 152872 ACCGTATTCGCGGCCTTGGTAAAGAGGGTATTACTCCGGTATTCCCGAAACTGGTTATGT 152931
||||||| |||||| ||||| | | | || |||| |||||||||||||| |
Sbjct 25145 ACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAAACTGGTATTCG 25086
Query 152932 TCATGGAAAAAGGAATTAACCTTGATCCAGAGGATCAAAACTATGACATCAAACAACTTG 152991
||| | || | |||| | | |||| || || ||||||||||| || |
Sbjct 25085 CCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACATCAAACAGCTGG 25026
Query 152992 CCCTGGAATGTGCTTCGAAACGCATGTACCCAGATATCATTAGCGCATCTAATAACCGCC 153051
| ||||| || || || ||||||||||| ||||| | | | | || | | |
Sbjct 25025 CGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAAC---TACGATCA-GGTC 24970
Query 153052 GTA----TCACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGTCGCAGTTTCCTTAGC 153107
||| | || || | | || | | | || |||||||| ||||| ||||| ||
Sbjct 24969 GTAAAAGTAACCGGGT----CATT--TAAAACGCCAATGGGTTGCCGCAGCTTCCTCGGC 24916
Query 153108 GTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAACCTTGGTGTGGTG 153167
|| | | ||||| ||||| | | || | || || ||||| ||||| || || |
Sbjct 24915 GTATACGAAGATGAAAACGGCGAGCAGATCCACGACGGGCGTAACAACCTCGGCGTCATC 24856
Query 153168 ACAATCAACCTCCCGCGCATTGCGATCGAAGCTGAAGCACAGGAAGATGAAGACGCACAC 153227
| | ||||| |||||||| ||| | || || || ||| | |||||
Sbjct 24855 AGCCTGAACCTGCCGCGCATCGCGCTGGAGGC-----CAAAGGCA-ATGAA--------- 24811
Query 153228 GACGCATTCTGGCGCATCCTTGATGAACGTCTGGATCTGTGCTTTGAA-GCCCTGATGAC 153286
| | ||||||| | || |||||||| ||| | ||| || || || ||||||||
Sbjct 24810 GCTGAATTCTGGACACTGCTGGATGAACGCCTGCAGCTG-GCGCGCAAGGCGCTGATGAC 24752
Query 153287 TCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTTGCGCCGATCCTGTACACAGAAGG 153346
||||||| |||| || || |||||| | || ||||| ||||| || | |||||
Sbjct 24751 CCGTATCGCCCGCCTTGAAGGGGTAAAAGCCCGCGTGGCGCCTATCCTCTATATGGAAGG 24692
Query 153347 TGCTTTTGGTGTCCGACTGAAACCGGATGATGAAAT-TCTGGAACTGTTCAAAAATGGGC 153405
|| | || || || |||||| |||| ||||| | ||| || | |||||||| || |
Sbjct 24691 GGCCTGCGGCGTGCGCCTGAAAGCGGACGATGACGTCTCT-GAGATCTTCAAAAACGGCC 24633
Query 153406 GTAGCTCTATCAGCCTTGGTTATATCGGACTACATGAAAC 153445
| || || || || |||||||| | ||||||||
Sbjct 24632 GCGCGTCGATTTCGCTGGGCTATATCGGCATCCATGAAAC 24593
>seq974
Length=31311
Score = 187 bits (206), Expect = 3e-42
Identities = 255/356 (72%), Gaps = 0/356 (0%)
Strand=Plus/Minus
Query 41654 CCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTG 41713
|||||||| || ||| |||| ||||| || || || |||||||| | |||||| ||
Sbjct 356 CCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGTACTG 297
Query 41714 ATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTAT 41773
|| || | ||||| |||| ||| | || || || || |||||||| ||
Sbjct 296 ATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAAATAC 237
Query 41774 ATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTAAA 41833
|||| || ||||| |||||||| | |||||||| | || || ||| ||||
Sbjct 236 GTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAGCCCG 177
Query 41834 ATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACA 41893
|| || || ||||||||| | || || ||| |||||||||| || || | |||||
Sbjct 176 ATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACG 117
Query 41894 GCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATCCG 41953
||||| |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 116 GCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCT 57
Query 41954 ATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGA 42009
|| ||||| ||||||| |||| ||||||||| |||||||||||| ||||||||
Sbjct 56 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCGTGGTGTTGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563785756820880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |