Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq962 134 2e-26
>seq962
Length=32987
Score = 134 bits (148), Expect = 2e-26
Identities = 530/828 (64%), Gaps = 23/828 (3%)
Strand=Plus/Minus
Query 171958 AAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGGT 172017
|| |||||||| || |||||| ||||||||||| || ||| || || | || |||
Sbjct 25740 AATGAAAACGCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGGT 25681
Query 172018 ACAGTTGCGAAACAATACGCACTCGAAGACTTTCTACCGAAGCACATTGCAGAAGCACAT 172077
| || || ||||| || || | | || | || ||| | | | ||| ||
Sbjct 25680 ATCGTCGCCAAACACTATGCCCGTCAGCACCTGCTGCCGCGCGATGTGGTCTCAGCGCAC 25621
Query 172078 ATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAATTCAAC 172137
| || || || || | ||| ||| | || || || || || ||| ||||||
Sbjct 25620 GAGCGCGGTGAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAAC 25561
Query 172138 TGTATGCTTATTGATATCAAAGGCATGCTTGAAAACGGATTTAAAATGGGTAATGCTGAG 172197
|||||||| ||||| | ||||||||||| |||| |||||||||||||| || |||
Sbjct 25560 TGTATGCTGATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGCCGAG 25501
Query 172198 ATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCACT---CAGATCATACAA 172254
|| ||| |||||| ||| | || || ||| ||||| ||||| ||
Sbjct 25500 ATTGAACCGCCAAAATCCATCTCCACCGCC---ACTGCGGTCACGGCACAGATTATCGCC 25444
Query 172255 CAAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTCTAGCA 172314
|| || || |||||||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 25443 CAGGTCGCCAGCCACATTTACGGCGGCACCACCATTAACCGCATTGACGAAGTGCTGGCC 25384
Query 172315 CCATATGTT--CGTAAGTCGTATTACAA--ATGGCTTGAGGTTGGTCGCGAAGAGCATCC 172370
|| | ||| || ||| | |||| | || | | | | | | ||||
Sbjct 25383 CCGTTTGTGACCGCAAGCTTCA--ACAAGCACCGCAAAACGGCCGAAGAGTGGCAGATCC 25326
Query 172371 CGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGTACGA 172430
|| ||| | | | ||||| | || || |||||||| || ||
Sbjct 25325 CG-----GACGCCGACG--GCTATGCGCACTCGCGCACT----GAGAAAGAGTGCTATGA 25277
Query 172431 CGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGACGCC 172490
||| || || || | |||||| | || || || |||| || | ||||| ||||||||
Sbjct 25276 CGCGTTCCAGTCGCTGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCC 25217
Query 172491 ATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGAAATG 172550
|| ||| | || || || || || |||||| | || ||| | |
Sbjct 25216 GTTTGTGACCTTCGGTTTTGGCCTGGGCACCAGCTGGGAATCGCGTTTGATCCAGCAGTC 25157
Query 172551 CATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCCCGAA 172610
||| |||| || || || | || || || |||| ||||| ||| | ||||||||
Sbjct 25156 CATCCTGCGCAACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAA 25097
Query 172611 ACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACGGCAT 172670
||| |||||| | ||| || || ||||| |||| ||||||||| ||||| |||
Sbjct 25096 ACTGGTATTCGCCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACAT 25037
Query 172671 TAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCTATGA 172730
|| |||| || || || ||||| || ||||||||||| || ||||| ||| ||| ||
Sbjct 25036 CAAACAGCTGGCGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAACTACGA 24977
Query 172731 AAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCG 172778
|| | ||| || ||| || ||||| | || ||||| || ||
Sbjct 24976 TCAGGTCGTAAAAGTAACCGGGTCATTTAAAACGCCAATGGGTTGCCG 24929
Score = 118 bits (130), Expect = 2e-21
Identities = 235/343 (69%), Gaps = 4/343 (1%)
Strand=Plus/Minus
Query 173221 TGGAAAGAACTGACTGGTTACGGATTTAGTCTGTACAGCACACCAAGCGAATCGCTATGT 173280
|||||||| || || ||||| || || |||||||| || |||||||| || ||
Sbjct 24492 TGGAAAGAGGAAACCGGCTACGGTTTCAGCCTGTACAGTACCCCAAGCGAGAACCTGTGC 24433
Query 173281 GATCGTTTCTGTCGTCTTGATCAAGAGAAGTACGGTATCATTACTGGTATCAATGACAAA 173340
|| || ||||| ||||| || | ||| ||| ||| | || | | || |||
Sbjct 24432 GACCGCTTCTGCCGTCTGGACACCGCCGAGTTCGGCATCGTGGAAGGCGTGACCGATAAA 24373
Query 173341 GACTACTATACAAACTCGTTCCACTTAGACGTATTCAAGAAAGTGAATCCGTTCGAGAAG 173400
| ||||| || ||| |||||| | ||||| ||||| || || |||| ||| |||
Sbjct 24372 GGTTACTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGGTAAACCCGTACGACAAG 24313
Query 173401 ATTGACTTTGAAGCATCGTACCCAGCATAT-GCAAACGGCGGTTTCATTTGCTATGCAGA 173459
|| ||||||||||| |||| || || || || |||||||| ||||| ||||| | ||
Sbjct 24312 ATCGACTTTGAAGCGGCGTATCC-GCCGATCGCCAACGGCGGCTTCATCTGCTACGGCGA 24254
Query 173460 GTTCCCGAACATGCGCGACAATATCAAAGGTCTAGAACGTGTATGGGATTA-TGCTCATA 173518
|| ||||||||| | |||| | || | || ||| || |||||||| ||| |
Sbjct 24253 GTACCCGAACATTCAGCACAACCTGAAGGCGCTGGAAGACGTGTGGGATTACAGCTATCA 24194
Query 173519 GCAAAGTTGCTTACTTCGGTACAAACACACCGATTGATCAATG 173561
|| | || | || | ||| || ||||| || || || ||||
Sbjct 24193 GC-ATGTGCCATATTACGGCACCAACACGCCCATCGACGAATG 24152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 791889441481040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |