Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq754 251 1e-61
>seq754
Length=71200
Score = 251 bits (278), Expect = 1e-61
Identities = 247/319 (77%), Gaps = 0/319 (0%)
Strand=Plus/Plus
Query 98892 ACTATGAAACAGTATCAAGATTTAATGGCTGAAGTCTTTGCGAAAGGTACGCCGAAGAAA 98951
|| ||||||||||||| || || ||| |||| | | | || |||||||| ||
Sbjct 66013 ACCATGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGGCACGCCGAAAAAC 66072
Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011
||||||||||| || || ||||| || || || |||||||||||||| ||||| || ||
Sbjct 66073 GACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAG 66132
Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTG 99071
||||| ||||| ||||| ||||| ||||| ||||| |||||||| || || |||||||||
Sbjct 66133 GAAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTG 66192
Query 99072 CTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATT 99131
|| ||||||||| ||||||| ||||| | ||| ||| | || || || ||||
Sbjct 66193 CTCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATC 66252
Query 99132 TGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCGG 99191
|||||||||||||| || |||| ||| |||| || ||||| ||||| |||||||||||
Sbjct 66253 TGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGC 66312
Query 99192 GCATGGACTGCGCATGATG 99210
|||||| | ||| |||||
Sbjct 66313 GCATGGCCAACGCCTGATG 66331
Score = 138 bits (152), Expect = 2e-27
Identities = 225/324 (69%), Gaps = 0/324 (0%)
Strand=Plus/Plus
Query 99585 AAGTTGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAAC 99644
||| | || || |||||||| |||||| || |||||| | || |||||||||||
Sbjct 66487 AAGCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCTGCCGTTTAAC 66546
Query 99645 ATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGC 99704
|| || ||||| || | | || ||| | || |||||| | ||| |||||
Sbjct 66547 ATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGGAAGTGGGG 66606
Query 99705 GATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGT 99764
||||| ||||||||||| || || ||||| || |||||| |||| ||| | | |
Sbjct 66607 GATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGCAGACCCAT 66666
Query 99765 ACTCAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCCGGAC 99824
||| | || ||||| ||| |||| ||||| || ||||| || || ||||
Sbjct 66667 CTCCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCAAACCGGCG 66726
Query 99825 TCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCCGGCT 99884
|| ||||| ||||| ||||| |||||||| || || ||||||||||| ||||| |
Sbjct 66727 TCAATCTTTGACTACCGCTTCGATGATTTTGAGATTGAGGGCTACGACCCGCACCCTGGC 66786
Query 99885 ATTAAAGCACCGGTGGCGATATGA 99908
|| ||||| || || || || |||
Sbjct 66787 ATCAAAGCGCCCGTCGCTATCTGA 66810
Score = 84.2 bits (92), Expect = 3e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 99307 ATATCGACCAGATTGCCAAAGTCATGGGCCAGTTGAAAAACGACCCGGATAATCGGCGTA 99366
|||| |||||||| ||| || ||| |||| |||||||||| || || || || |
Sbjct 66338 ATATTGACCAGATCACCACCGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAA 66397
Query 99367 TCATCGTTAGTGCATGGAACGTAGCTGACCTTGACGATATGGCCTTAGCTCCTTGCCACG 99426
|||| ||| || |||||||| | || || ||| | ||||| | || || |||||||
Sbjct 66398 TCATTGTTTCCGCCTGGAACGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACG 66457
Query 99427 CCTTCTTCCAGTTTTA 99442
| ||||||||||| ||
Sbjct 66458 CGTTCTTCCAGTTCTA 66473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716620729419760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |