Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq813 150 5e-32 >seq813 Length=55966 Score = 150 bits (166), Expect = 5e-32 Identities = 209/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235 |||| | ||||| || || | | || | ||| || || ||||||||||| || | Sbjct 13773 GAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACA 13714 Query 33236 TGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATA 33295 |||| ||| ||||| || ||| | | ||||| || || || ||| |||| Sbjct 13713 TGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATA 13654 Query 33296 AAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGC 33355 |||| || || || | |||||||||||| |||||||| |||||||| | || || || | Sbjct 13653 AAGCGACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTGGTGCTGTTTGGCAAAC 13594 Query 33356 TGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAAT 33415 ||||||| || || || || || ||||| ||||| |||||||| ||| | ||||| || Sbjct 13593 TGGCAGAAGTTGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATCGAAGGCCAAC 13534 Query 33416 TACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAA 33468 | || || || |||||||| ||||| ||| | ||| || ||||| || ||| Sbjct 13533 TGCGCACCCGTAAATGGACCGATCAGTCCGGCGCTGAGAAGTACACCACCGAA 13481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152041560875592