Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021561.1
Length=37324
Score E
Sequences producing significant alignments: (Bits) Value
seq997 250 6e-62
>seq997
Length=29618
Score = 250 bits (276), Expect = 6e-62
Identities = 557/822 (68%), Gaps = 13/822 (2%)
Strand=Plus/Minus
Query 31841 ACTTCCAAAGTAAGGAAT-AGCAAATGGCTACTACAGTAAACTCTGATTTAGTAATCTAC 31899
|||||| || ||||| || | | ||| |||| || || || ||| | | || ||
Sbjct 9721 ACTTCCGAAATAAGGGATTAACCCATGTCTACCACTGTTAATAGTGACCTGATCATTTAT 9662
Query 31900 AATGACACGGCCCAGACTGCGTACCTAGAGCGCAACATGGACAACCTAGCTGTGTTCAAT 31959
| ||| ||| ||||| || | || |||||| ||||||||| ||| | |||||
Sbjct 9661 GACGACCTGGCGCAGACCGCTTTTCTCGAGCGCCGTCAGGACAACCTGGCTATTTTCAAC 9602
Query 31960 GAAAACTCACGCGCTGCGATTGGCCTGAACTCTGAGCTAATCGAAGGTGACTTGAAGCTA 32019
| ||| || |||||| ||| | ||||| || ||||| || || || |
Sbjct 9601 GCGTCCTCCAACGGTGCGATCCTGCTGGATAACGAGCTGATTGAAGGCGATTTCC-GCAA 9543
Query 32020 -CGCTCGTTCTACAAAGTGGGCGGCTCTATCGCTGACCGTGATGTGAATTCAACGGCTAC 32078
|| | |||||||||||||||||||| |||| ||||| || || || || | ||
Sbjct 9542 GCGAGCCTTCTACAAAGTGGGCGGCTCAATCGAATCGCGTGACGTTAACTCCACCGATAA 9483
Query 32079 CGTTGCAGGTATTAAGATTGCAGCGGATGAAATGGTATCAGTGAAAGTGCCTTGGAAATA 32138
|| | |||| ||||||| || | |||| ||||| || |||| || ||||||||
Sbjct 9482 AGTGACGGGTAAGAAGATTGGCGCCGGTGAAGCCGTATCCGTCAAAGCACCGTGGAAATA 9423
Query 32139 CGGCCCATACGAAACCACAGAAGAAGCGTTTAAGCGTCGCGCACGTTCGCCTGAGGAATT 32198
||| ||||||||||| || ||||||||||| || || |||| || ||| ||| || ||
Sbjct 9422 CGGTCCATACGAAACTACTGAAGAAGCGTTCAAACGCCGCGGCCGCTCGGTTGATGAGTT 9363
Query 32199 CTCTGAAATCATCGGTCAAGACATGGCAGACGCTACAATGTCAGGTTGGATTGGTTACGC 32258
||| ||| | ||||| || |||| |||||||| || ||| | | ||||
Sbjct 9362 CTCAGAAGTGATCGGCACTGATGTGGCTGACGCTACGCTGGAAGGCTACGTGAAATACGG 9303
Query 32259 ATTGAATGCACTACAAGGC-GCAATCGGCTCTAACGCCGGCATGAACGTATCTGGCGAGC 32317
||||| || || | ||| ||||| ||| | ||||| | ||| || ||| ||
Sbjct 9302 CTTGAAGGCCCT-GACGGCAGCAATTGGCGCCAACGCGGATATGGTGGTCACTGCAGACA 9244
Query 32318 TTGCAACTGAAGGTAAGAAAGTTCTTACCAAAGGTTTGCGCACAATGGGCGACAAAGCAT 32377
||| || || |||||||| || || || |||| | |||||||| |
Sbjct 9243 TTGAGACCGACGGTAAGAAGACCCTGACACGTGGCCTGCGTAAGTACGGCGACAA--GTT 9186
Query 32378 CATC--TATCGCAATCTGGGTGATGGATTCAACGTCTTACTTTGACATCGTTGACGAGGC 32435
|| | | ||| ||| || ||| | || | | ||||| |||||||| || |||||
Sbjct 9185 CAACCGTGTCGTGCTCTTCGTTATGCACTCCGCTACCTACTTCGACATCGTGGATGAGGC 9126
Query 32436 GATTGACAACAAGCTTTATGAAGAAGCTGGTGTTGTGGTTTACGGTGGTACA-CCTGGCA 32494
||| | |||||| | || |||||||| || || ||||||||||| || ||| || ||||
Sbjct 9125 GATCGCCAACAAAATCTACGAAGAAGCGGGCGTAGTGGTTTACGGCGG-ACAGCCGGGCA 9067
Query 32495 CGCTTGGTAAGCCTGTGCTTGTTACTGA-CCAATGCCCAGCAACTAAGATTTTCGGTCTT 32553
| || ||||| || ||||| ||||| || | ||| | || | ||| | || ||
Sbjct 9066 CCCTGGGTAAACCGGTGCTGGTTACCGATACCATGGAC-GCTGATGCGATCCTTGGGCTG 9008
Query 32554 GTAGCTGGCGCGGTAATGGTTACTGAGTCTCAAGCGCCTGGTATGCGCTCTTACCAAATC 32613
|| || || || || | || ||||||||||| || || || | || || ||| | |||
Sbjct 9007 GTGGCCGGGGCAGTGACTGTAACTGAGTCTCAGGCTCCGGGGTTCCGTTCATACGACATC 8948
Query 32614 GACGACCAAGAAAACTTGGCTATCGGTTTCCGCGCTGAGGGC 32655
|||| || |||||| |||| ||||| | ||| ||||| |||
Sbjct 8947 AACGATCAGGAAAACCTGGCAATCGGCTACCGTGCTGAAGGC 8906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119312658138808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |