Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_021777.1 Length=43447 Score E Sequences producing significant alignments: (Bits) Value seq997 93.3 1e-14 >seq997 Length=29618 Score = 93.3 bits (102), Expect = 1e-14 Identities = 146/205 (71%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 882 ATCTGCCGCTCGATGGATAACCCTGGTTCGATTGTGGGTTTCAAAATCGCCGCAGCGTGC 941 |||||||| || ||||| || || || ||||| || ||||||||||||| ||| Sbjct 14050 ATCTGCCGTTCAATGGAGAAGCCCGGATCGATAGTCGGTTTCAAAATCGGTAACGCGATG 13991 Query 942 GTGGATGAGCTCGATGT-ATTGAGTCGTGAGAAAGCTGAGCTGGCGTGGAACAAAATCGT 1000 || |||||||| || || || | | | | ||||| | | ||| ||| |||||| | Sbjct 13990 GTTGATGAGCTGGACGTCATGGCGGC-AGCCAAAGCGCAACAGGCATGGCGAAAAATCAT 13932 Query 1001 AGCCCGTATGCGT---CTGGTTATTCCGGGGGTAACCAACCACATCTCTGTAACCACGAC 1057 ||||||||||||| |||| | ||| | ||| |||| ||| ||||| || Sbjct 13931 AGCCCGTATGCGTTACAAGGTTGAT---GGGTTGCGTAACGGCATCGATGTCACCACAAC 13875 Query 1058 GCCGGAAGGGTTCAAGTTCGTATAC 1082 ||| ||||||||||||||||| ||| Sbjct 13874 GCCAGAAGGGTTCAAGTTCGTCTAC 13850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138905840721652