Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq986 942 0.0
seq960 176 1e-39
seq1102 109 1e-19
>seq986
Length=30461
Score = 942 bits (1044), Expect = 0.0
Identities = 988/1296 (76%), Gaps = 2/1296 (0%)
Strand=Plus/Plus
Query 23399 TTCAATATAGATTCTACCTATATATTCTCCGAGAACACCAATCCCGATCAGTTGCACTCC 23458
||| ||||| || || || || || |||||||| |||||||| ||||| |||||||| ||
Sbjct 11779 TTCGATATAAATCCTTCCAATGTACTCTCCGAGCACACCAATGCCGATAAGTTGCACACC 11838
Query 23459 ACCCAAGAAAAGTATTGATACAAGCAGGGAGGGATACCCGCGTACTGGGTTACCAAAGAC 23518
||| | |||||| || || ||||| | || ||||| || || || | || ||||| |
Sbjct 11839 ACCAAGGAAAAGGATGGAGACAAGTAATGACGGATAGCCACGCACAGCATTGCCAAAAGC 11898
Query 23519 AAGGGTGTCTATAATCATCCATGCACCATATAAAAATGAAATGCTTGCAACAAACAAG-C 23577
|| ||||||| |||||||||||| ||||| | ||||| | | |||||| |||||| |
Sbjct 11899 CAGAGTGTCTACAATCATCCATGCGCCATAGAGAAATGCGAGACCTGCAAC-AACAAGCC 11957
Query 23578 CTATATAAGTCCATACGCGAAGAGGAAAGGTTGAAAAACTTGTGATACCTTCCAGTGCCA 23637
| ||||| ||||| | ||| ||||| ||||| || ||||| |||||||| || || || |
Sbjct 11958 CGATATAGGTCCACATGCGCAGAGGGAAGGTAGAGAAACTGGTGATACCCTCAAGAGCAA 12017
Query 23638 GATTCCATAATTTCCAGCCATTAAATTTTGAGATGCCAGCAACACGCTCTGCGCGTACAT 23697
| |||||||| ||||| ||||||||||||| |||| ||||| || || ||||| |||
Sbjct 12018 GGTTCCATAACTTCCAACCATTAAATTTTGTACTGCCTGCAACGCGTTCAGCGCGGGCAT 12077
Query 23698 ATTCCACGACATCCGTCTGACCACCCACCCAGCTCAGTATGCCTTTCATGAAAAGATTGC 23757
|||| || |||||||| ||||||| ||||||||||| | || |||||||| || || |
Sbjct 12078 ATTCAACAACATCCGTGCGACCACCAACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTC 12137
Query 23758 GCTCAGGCAACAGTTTAATGTTCTCCACAACCTCACGAGACATGAGTCGAAAATCTCCGA 23817
||| |||| || || ||||| || || |||||||| ||||| || || ||||| ||||
Sbjct 12138 TCTCTGGCATGAGCTTGATGTTTTCGACCACCTCACGGGACATCAGACGGAAATCACCGA 12197
Query 23818 CATTTTCCTCGATCTTTGGGGTGCTTATTTTGTTGTGTAATTTATAGAACCACTCAGCTG 23877
||||||||||||||| ||| | || ||||||||||| || |||||||||||||| || |
Sbjct 12198 CATTTTCCTCGATCTGCGGGTTACTGATTTTGTTGTGCAACTTATAGAACCACTCGGCAG 12257
Query 23878 TCTTACGTTTCAGTCGTCCATCAGTTGAGCGGTCTGAACGTTTAGCAAGCACCATGTCAG 23937
||||||||||| || | |||||| |||||||| || || || || || |||||||| |
Sbjct 12258 ATTTACGTTTCAGACGACTATCAGTGGAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGG 12317
Query 23938 CACCTGCCTGCCACTTTTCAATAAGATGAGGGATAACCTCAATTGGGTCTTGCAGGTCGA 23997
| || |||||||| || || || ||||| || || |||||||||||||| |||| ||| |
Sbjct 12318 CCCCGGCCTGCCATTTCTCTATCAGATGCGGAATGACCTCAATTGGGTCCTGCAAGTCTA 12377
Query 23998 CATCAATAGGAATTACAGCATCGCCGCTTGCATGGTCTAACCCTGCAAATAAGGCTGGTT 24057
| ||||| || || | || || || | || ||||||| || || ||||| || || |
Sbjct 12378 CGTCAATCGGGATAATTGCTTCACCTGTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCT 12437
Query 24058 CTTTACCAAAGTTGCGTGTAAATGACAGCGGAACAACTAGCGGGTCTGAAACAGCCAGCG 24117
|||| ||||||||||| || || || || ||||| || ||||| |||| || ||| ||||
Sbjct 12438 CTTTTCCAAAGTTGCGGGTGAAGGAAAGAGGAACCACAAGCGGATCTGCAATAGCAAGCG 12497
Query 24118 CGTTAATAATTGACTCTGTGGCATCTTTACTTCCGTCATTTATGAATACAATTTCTACTT 24177
|||| |||||||| || || |||||||| || |||||||| ||||| || || || ||||
Sbjct 12498 CGTTTATAATTGATTCGGTCGCATCTTTGCTACCGTCATTGATGAAGACTATCTCAACTT 12557
Query 24178 CATATGGCTTCAACTCTTGGAATTCACGTACCGTTTTATAGAAAACAGGTATCGCTTCTT 24237
| | |||| ||| ||| || || || || | ||| ||||| | || || ||||| |
Sbjct 12558 CCTGCTGCTTTAACCCTTCAAACTCCCGCACGGCTTTGTAGAAGATTGGAATTGCTTCCT 12617
Query 24238 CTTCATTGAAGACAGGAACGACAAGAGATATTTTCATTTCGCATCCCTAAAGACAATGAA 24297
||||||| || || |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 12618 CTTCATTAAACACCGGAACGACCAGAGAAATTTTCATTTCGCATCCCTAAAGACAATGAA 12677
Query 24298 CTTTGAATAGACGAAACCGCACACCAGACTGATGGCGGAGAAGGTGATAAGAGTGACTAT 24357
||||||||||| ||| |||||||||||||||||||||||||| ||| | || | ||
Sbjct 12678 CTTTGAATAGATGAAGCCGCACACCAGACTGATGGCGGAGAAAACGATTAACGTAATAAT 12737
Query 24358 TGGAGGAAGTGAGCATTTATCAGCTGCCCAACCAACAATCACACTCAATATTCCCATAAA 24417
|| | ||| |||| ||||| ||||||||| | |||| | ||||||||
Sbjct 12738 CGGGGCAAGCCCTGATTTGTCAGCACACCAACCAACGGCGGCGCTCAGCGTACCCATAAA 12797
Query 24418 TCCCACGTAATACATGTAGCGCATCGCTGTAGTCGATGCTTTGAATGTGAATCTTGCATT 24477
|| || || |||||||||||| | || || || | || || ||||| || || ||
Sbjct 12798 CCCTACATACAGCATGTAGCGCATGGTCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTT 12857
Query 24478 CGCGAAGAAGCTAAAGCTCACAGCCACTACGAAACCTGTGAAGTTTGCCAGAGCCTGACT 24537
||||| |||||||| ||| || ||||| || || | |||||| |||||||| || |
Sbjct 12858 TGCGAAAAAGCTAAATGACACCGCAACTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCC 12917
Query 24538 GGTATGTGCGGCATAGATACATACACCAAAAACCACCCAGTGTATAAGTGTGTTCAGCAC 24597
|| || | | || ||| | | | || || |||||||| || || ||||| | ||
Sbjct 12918 TGTGTGGAAGACGTAAATAGAAATGGCGAACACAACCCAGTGAATGAGCGTGTTGATAAC 12977
Query 24598 ACCTATAGATGTGTACTTTACAAATAACTTTAACATTTATTTAATCAATGAGCTCTGAAA 24657
|||||| ||||||||| | | ||||||||||||||| ||||| ||| || ||||
Sbjct 12978 ACCTATTGATGTGTACCTGGCGAATAACTTTAACATTATAGAAATCAGTGAATTCGGAAA 13037
Query 24658 GGCATGAAGTCTATCATCCAAGTCTCAATTGATCGA 24693
|| |||||| || |||| | || ||||||||
Sbjct 13038 GGTCTGAAGTGTAGCATCACACATGCACTTGATCGA 13073
>seq960
Length=33163
Score = 176 bits (194), Expect = 1e-39
Identities = 354/518 (68%), Gaps = 8/518 (2%)
Strand=Plus/Plus
Query 8730 CCGCCCGCGCAGCGGTGTTTATCCGCAACGAT-CCGGCACGTCCCACGCAGACCGGTGAG 8788
|||| ||| | |||||||| ||| | |||| || || ||||| || |||| ||||
Sbjct 18192 CCGCGCGCACCGCGGTGTTCATCTCCGCCGATGCCAGC-CGTCCGACCCAGAGCGGTAGC 18250
Query 8789 CTGGTGGGTATGCTGCCTGCGCCGAAGGGGAAACGGTTCACGATGACCGAGCAGCAGACC 8848
||| || || || || || | | || ||||| ||||||||| ||| |
Sbjct 18251 CTGCCAGGCCTGGACCCGGCCGCGGCCAGCGAGCGTTTCACCCTGACCGAGCGCCAGTCG 18310
Query 8849 CTGCTGTCTCATGGCGTGGCAACGGCGTATGTCGAAAGCGGGGTGCTGCGCATTCAGCGT 8908
||||| | ||| | || || || || |||| |||| ||||||| ||||||
Sbjct 18311 CTGCTCAACTACGGCATCGCCACCGCCTACTACGAAGGCGGCTACGTGCGCATCCAGCGT 18370
Query 8909 GATGTCACCACGTACAGGAAAAATTCTTACGGGGTTGCGGATAACAGCTACCTCGACAGC 8968
|||| || ||| ||| || ||| ||| ||||| ||| |||||| ||||||
Sbjct 18371 TCGATCACTACCTACCAGAAGAACGCTTTCGGCCAGGCGGACAACTCCTACCTGGACAGC 18430
Query 8969 GAGACGCTGCATACCAGT--GCGTATGTACTGCGCAAACTGAAATCCGTCATTACCAGTA 9026
||||| ||||| ||||| || || | ||||| ||| || ||| || ||||| |
Sbjct 18431 GAGACCCTGCA--CCAGTCGGCCTACATCGTGCGCCGCCTGCAAAGCGTGATCACCAGCA 18488
Query 9027 AGTACGGGCGTCACAAGCTTGCCAGCGACGGTACCCGCTTTGGTCCCGGTCAGGCGATTG 9086
|||||||||| |||||| | ||| ||| || |||||||| || |||| ||| |||| |
Sbjct 18489 AGTACGGGCGCCACAAGTTGGCCGCCGATGGCACCCGCTTCGGCGCCGGCCAGCCGATCG 18548
Query 9087 TCACCCCG-GCGGTAATCAAAGGGGAACTGCTGGCAACCTACCGTCAGCTTGAGCGTGCG 9145
|||||||| || | || || || ||| | || ||| |||| |||| |
Sbjct 18549 TCACCCCGAGCACCATTC-GCGGCGAGCTGATCGCCCAGTACGCCAAGCTGGAGCTGGAA 18607
Query 9146 GGGATCGTGGAAAACTACGAACTGTTTAAGCAGTACCTGGTTGTGGAGCGTGATGCCAGC 9205
|| ||||||||| ||| ||||| || ||||||| ||||| || |||||| |
Sbjct 18608 GGCCATGTGGAAAACGCCGAGCTGTTCGCCGAGCACCTGGTGGTGGAACGCGATGCCCGG 18667
Query 9206 GATCCGAACCGCCTGAACACGCTGTTCCCGCCTGACTA 9243
|| ||||||||| | ||| |||||||||||| |||||
Sbjct 18668 GACCCGAACCGCATCAACGTGCTGTTCCCGCCGGACTA 18705
>seq1102
Length=22075
Score = 109 bits (120), Expect = 1e-19
Identities = 62/63 (98%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 24835 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAATCAATAAG 24894
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215
Query 24895 TTA 24897
|||
Sbjct 2214 TTA 2212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132595575156836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |