Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq216 154 2e-31
seq215 154 2e-31
seq666 140 5e-27
seq486 129 9e-24
seq236 114 2e-19
seq203 109 9e-18
seq65 98.7 2e-14
seq3 87.8 3e-11
seq27 86.0 1e-10
>seq216
Length=582351
Score = 154 bits (170), Expect = 2e-31
Identities = 181/243 (74%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||||||||| || |||||||||| |||| || || ||| |||
Sbjct 33735 TGTACTTGGTGACCGCCTTGGTACCTTCACTGACGGCGTGCTTGGCGAGCTCACCGGGCA 33676
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || | |||||| |||||||| |||
Sbjct 33675 GCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGATCGTCGAACGCTTGTTGTAGT 33616
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| | | | | || || | | |||| || |||| |||||||| || ||||||||
Sbjct 33615 GGGCGAGACGAGAC--GCTTCCGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTT 33558
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | || |||||| || ||||||||| |||||||| | ||||||
Sbjct 33557 CATGATTGACATGGCCTTCGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAACACCTT 33498
Query 1485708 GTA 1485710
|||
Sbjct 33497 GTA 33495
Score = 154 bits (170), Expect = 2e-31
Identities = 181/243 (74%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||||||||| || |||||||||| |||| || || ||| |||
Sbjct 48280 TGTACTTGGTGACCGCCTTGGTACCTTCACTGACGGCGTGCTTGGCGAGCTCACCGGGCA 48221
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || | |||||| |||||||| |||
Sbjct 48220 GCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGATCGTCGAACGCTTGTTGTAGT 48161
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| | | | | || || | | |||| || |||| |||||||| || ||||||||
Sbjct 48160 GGGCGAGACGAGAC--GCTTCCGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTT 48103
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | || |||||| || ||||||||| |||||||| | ||||||
Sbjct 48102 CATGATTGACATGGCCTTCGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAACACCTT 48043
Query 1485708 GTA 1485710
|||
Sbjct 48042 GTA 48040
>seq215
Length=584702
Score = 154 bits (170), Expect = 2e-31
Identities = 181/243 (74%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||||||||| || |||||||||| |||| || || ||| |||
Sbjct 546906 TGTACTTGGTGACCGCCTTGGTACCTTCACTGACGGCGTGCTTGGCGAGCTCACCGGGCA 546847
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || | |||||| |||||||| |||
Sbjct 546846 GCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGATCGTCGAACGCTTGTTGTAGT 546787
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| | | | | || || | | |||| || |||| |||||||| || ||||||||
Sbjct 546786 GGGCGAGACGAGAC--GCTTCCGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTT 546729
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | || |||||| || ||||||||| |||||||| | ||||||
Sbjct 546728 CATGATTGACATGGCCTTCGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAACACCTT 546669
Query 1485708 GTA 1485710
|||
Sbjct 546668 GTA 546666
Score = 154 bits (170), Expect = 2e-31
Identities = 181/243 (74%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||||||||| || |||||||||| |||| || || ||| |||
Sbjct 556400 TGTACTTGGTGACCGCCTTGGTACCTTCACTGACGGCGTGCTTGGCGAGCTCACCGGGCA 556341
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || | |||||| |||||||| |||
Sbjct 556340 GCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGATCGTCGAACGCTTGTTGTAGT 556281
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| | | | | || || | | |||| || |||| |||||||| || ||||||||
Sbjct 556280 GGGCGAGACGAGAC--GCTTCCGCGGCGATACGCTCGAAGATGTCGTTCACGAACGAGTT 556223
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | || |||||| || ||||||||| |||||||| | ||||||
Sbjct 556222 CATGATTGACATGGCCTTCGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAACACCTT 556163
Query 1485708 GTA 1485710
|||
Sbjct 556162 GTA 556160
>seq666
Length=109244
Score = 140 bits (154), Expect = 5e-27
Identities = 191/263 (73%), Gaps = 8/263 (3%)
Strand=Plus/Minus
Query 2018912 CCTCCCGTGGATCGAAAAGTACCGCCCGACAGT-GCTCGACGACATCGTGGGCAACGAGC 2018970
|||||| |||||||| |||||||| ||| ||| | || |||||||||||||||||||
Sbjct 36503 CCTCCCATGGATCGAGAAGTACCGGCCG-CAGACGTTCAGCGACATCGTGGGCAACGAGG 36445
Query 2018971 ACGCCGTTGCCTACCTCAAGGCGCTGGCCGCCGAC---GGCAACATGCCCAACCTCTTGC 2019027
|| | || | || ||| || |||| | |||||| ||||||| | |
Sbjct 36444 ACACGGTGTCGCGGCT---GGCCGTGTTCGCCAAGTCGGGCAACGCGCCCAACGTGATCA 36388
Query 2019028 TGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCT 2019087
| ||||||||||| ||| |||||||||||| | ||| |||||||||||||| ||
Sbjct 36387 TCGCGGGCCCGCCGGGCGTGGGCAAGACCACCACGATCCTGTGCCTGGCGCGCGCCCTGC 36328
Query 2019088 TGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGG 2019147
| || || || | ||| ||||||||||| ||||| || || |||| |||||| | |
Sbjct 36327 TAGGGGCCTCCTTCCGCGACGCCGTGCTCGAGCTCAACGCCTCCAACGACCGCGGCATCG 36268
Query 2019148 ACGTCGTGCGTAGAATCATCAAG 2019170
|||||||||| | | ||||||
Sbjct 36267 ACGTCGTGCGCAACAAGATCAAG 36245
>seq486
Length=217039
Score = 129 bits (142), Expect = 9e-24
Identities = 185/261 (71%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| |||||| || ||||||||||||| ||| | ||||| ||||||||||| || |||||
Sbjct 176150 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATGGGCACCAGCCCGTT 176209
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
||| ||||||| |||||||| | ||||| ||| || | | || | ||
Sbjct 176210 GGAGACGCCGTTCGTGCCCGCGATGTAGGTGCCTTTCGCTCTGATGCAATGAACATGAAC 176269
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|| |||||||| || | ||||| || | || |||| ||||| || |||||||| ||
Sbjct 176270 TCCTATGCCGCCCGCGGATTTGGATATTAATGCACACTGCTTCAGAGTGTCGTAGATACC 176329
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
||||| |||| |||||||| | | || || || || ||| || ||||| | ||
Sbjct 176330 TTCGATGCTGTCGTCCTTCATGGCGATGAGGAAACATGAGGAGAGCTGAGGGCGGGGGGT 176389
Query 2073777 GCCGGCATTGAAGAGCGTGGG 2073797
| |||| ||| || |||||
Sbjct 176390 GGCGGCCGAGAACAGGGTGGG 176410
>seq236
Length=545527
Score = 114 bits (126), Expect = 2e-19
Identities = 165/226 (73%), Gaps = 14/226 (6%)
Strand=Plus/Minus
Query 2174945 GCCCCGCAGCACAATGTGACCGTCGGGGTTGCCAGTGCTGCG---GCAGGCGGCAGCGC- 2175000
||| ||||| | | ||| ||||| |||||||| ||||| ||||| ||||| |
Sbjct 5629 GCCGCGCAGGATCACGTGCCCGTCCGGGTTGCC----CTGCGTTTGCAGGAGGCAGACCT 5574
Query 2175001 GACCGTCGCC--GTCGATCCAGA-GAAAGGTGTGTGGCTGCGCGGCGGTGCGCACGGCAT 2175057
| || |||| || ||| | || |||| | ||| ||| | || || | ||||| ||| |
Sbjct 5573 GGCC--CGCCTGGTTGATACCGACGAAACG-GTGCGGCAGGGCAGCCGCGCGCATGGCGT 5517
Query 2175058 CGAGCGCCGTTGCCACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCG 2175117
|| |||||| |||| |||||| ||||| ||||||||||| || ||||||| || |||
Sbjct 5516 TGATCGCCGTCGCCAGGCTGCCATCGGTACCGTTTTTAAAACCAACCGGCATCGACAGGC 5457
Query 2175118 CCGACGCCATTTCGCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCC 2175163
| |||||||| |||||||| || || ||||| ||||||||
Sbjct 5456 CAGACGCCATCTCGCGGTGGGTTTGCGATTCCGTGGTACGCGCGCC 5411
>seq203
Length=607560
Score = 109 bits (120), Expect = 9e-18
Identities = 197/284 (69%), Gaps = 32/284 (11%)
Strand=Plus/Plus
Query 2018912 CCTCCCGTGGATCGAAAAGTACCGCCCGACAGT-GCTCGACGACATCGTGGGCAACGAGC 2018970
||| || |||||||| |||||||| ||| ||| | || |||||||||||||||||||
Sbjct 82849 CCTTCCATGGATCGAGAAGTACCGGCCG-CAGACGTTCAGCGACATCGTGGGCAACGAGG 82907
Query 2018971 AC---------------GCCG---TTGCCTACCTC----AAGGCGCTGGCC--GCCGACG 2019006
|| |||| ||||| || || || |||| || || | |
Sbjct 82908 ACACGGTGTCGCGGCTGGCCGGGTTTGCC-ACGTCGGGGAAAGCGC---CCAAGCGG--G 82961
Query 2019007 GCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGCATCG 2019066
| ||| ||||| | | | | ||||||||||| ||| |||||||||||| | |||
Sbjct 82962 GGAACGCGCCCAGCGTGATCATCGCGGGCCCGCCGGGCGTGGGCAAGACCACCACGATCC 83021
Query 2019067 CGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATG 2019126
|||||||||||||| ||| | || || || | ||| ||||||||||| ||||| |
Sbjct 83022 TGTGCCTGGCGCGCGCGCTGCTAGGGGCCTCCTTCCGCGACGCCGTGCTCGAGCTCAACG 83081
Query 2019127 CGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAG 2019170
| || |||| |||||| | ||||||||||| | | ||||||
Sbjct 83082 CCTCCAACGACCGCGGCATCGACGTCGTGCGCAACAAGATCAAG 83125
>seq65
Length=1244346
Score = 98.7 bits (108), Expect = 2e-14
Identities = 137/191 (72%), Gaps = 7/191 (4%)
Strand=Plus/Minus
Query 794355 GATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT 794414
||||||||| ||||| ||| || ||||||||||| || | ||| || ||||| |||||
Sbjct 631682 GATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTTTAAGCCAGAAGAT 631623
Query 794415 GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTC 794474
|| ||||||||| ||||| ||||||||||| || || || || | || | | ||
Sbjct 631622 GGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATGCTACTATTCTTTC 631563
Query 794475 GGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTC 794532
| || || || |||| || |||||||| ||||||||| || ||||| |||
Sbjct 631562 ACCGAATGT-----TGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTCAGCCTTCTTC 631508
Query 794533 CTCACCGAGGG 794543
| || ||||
Sbjct 631507 TTTACACAGGG 631497
>seq3
Length=2764502
Score = 87.8 bits (96), Expect = 3e-11
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 1812783 TGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGAT 1812842
||||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||
Sbjct 713128 TGCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGAT 713187
Query 1812843 CCTCACCCGAGGTATATC 1812860
||||||||| || |||||
Sbjct 713188 CCTCACCCGGGGCATATC 713205
>seq27
Length=1723060
Score = 86.0 bits (94), Expect = 1e-10
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843
|||||||||||||||| ||| ||||| | || ||||| | |||||||||||||||||
Sbjct 712996 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 712937
Query 1812844 CTCACCCGAGGTATATC 1812860
|||||||| || |||||
Sbjct 712936 CTCACCCGGGGCATATC 712920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916055564037566
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