Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_022343.1
Length=159991
Score E
Sequences producing significant alignments: (Bits) Value
seq974 116 4e-21
>seq974
Length=31311
Score = 116 bits (128), Expect = 4e-21
Identities = 206/295 (70%), Gaps = 8/295 (3%)
Strand=Plus/Minus
Query 15049 TCTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGT 15108
||| || || || |||||| | ||||| || || || |||||||||||||| || |||||
Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301
Query 15109 TCTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGA 15168
|||||| | ||| |||| ||||||||||||||||| || ||| | ||||| |
Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241
Query 15169 CTATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAG 15228
|| || | ||||||| || ||||| | ||| ||| || || | | |||||
Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAG 181
Query 15229 TCCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTG-GTTCCATTC-ATCA--AATATC 15284
|| || || ||||| || ||||||| || ||| | || ||| || | | | |
Sbjct 180 CCCGATTCGCGGCGGTGAAGCATTCCACACCGG-CTGTATCCCGTTCTATAAGCACTTCC 122
Query 15285 TGACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTAC 15339
||| ||| | || || |||||||||||||| | ||||| |||||||| ||
Sbjct 121 AGAC---GGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGAC 70
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511831721916240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |