Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq974 116 4e-21 >seq974 Length=31311 Score = 116 bits (128), Expect = 4e-21 Identities = 206/295 (70%), Gaps = 8/295 (3%) Strand=Plus/Minus Query 15049 TCTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGT 15108 ||| || || || |||||| | ||||| || || || |||||||||||||| || ||||| Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301 Query 15109 TCTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGA 15168 |||||| | ||| |||| ||||||||||||||||| || ||| | ||||| | Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241 Query 15169 CTATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAG 15228 || || | ||||||| || ||||| | ||| ||| || || | | ||||| Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAG 181 Query 15229 TCCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTG-GTTCCATTC-ATCA--AATATC 15284 || || || ||||| || ||||||| || ||| | || ||| || | | | | Sbjct 180 CCCGATTCGCGGCGGTGAAGCATTCCACACCGG-CTGTATCCCGTTCTATAAGCACTTCC 122 Query 15285 TGACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTAC 15339 ||| ||| | || || |||||||||||||| | ||||| |||||||| || Sbjct 121 AGAC---GGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGAC 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511831721916240