Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1030 149 4e-31 seq197 138 7e-28 >seq1030 Length=27445 Score = 149 bits (164), Expect = 4e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || ||||| || | ||||| |||| ||||| ||| |||||||| ||||| ||||| Sbjct 2671 TTACCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCG 2730 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| | || |||| ||||| || || || |||||||||||||| |||||||| | Sbjct 2731 GACAGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGG 2790 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||||||||| | || || |||||| | | || | || ||||| Sbjct 2791 GGGATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCC 2850 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| ||| |||||||| ||||| |||||||| || ||||||||||| Sbjct 2851 ACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCAT 2900 >seq197 Length=620651 Score = 138 bits (152), Expect = 7e-28 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || | ||| |||| ||||| ||| ||||||||||||||| ||||| ||| Sbjct 447878 CCTCCGCGCAGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAT 447937 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || |||||||| || ||||||||||| || ||||||||| | || Sbjct 447938 AGGGTGCGGCCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGG 447997 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||||| | || || || || || || || | || || || | Sbjct 447998 ATACCCTCCTTGTCCTGGATCTTGGCCTTTAC--ATTCTCGATGGTGTCCGAAGCTTCAA 448055 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||||||||| || ||||| || || |||||||| Sbjct 448056 CTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104 Score = 118 bits (130), Expect = 7e-22 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||| ||||||||||| ||||| || ||| |||| |||| Sbjct 446949 AGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCT 447008 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || ||||||||||| || ||||||||| | || | ||||||||||| Sbjct 447009 TCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 447068 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGC---CTCGACATCAACGGTTAT 34941 | || || ||| || || | ||||| || ||| |||||| |||| || || Sbjct 447069 TGGATCTTAGCTTTAAC--AT--TCTCGATAGTATCGGCTGGCTCGACCTCAAGAGTGAT 447124 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || ||||| || || |||||||| Sbjct 447125 AGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160 Score = 114 bits (126), Expect = 8e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| |||| |||||| || ||||| ||||| || | | |||| |||| ||| Sbjct 446268 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCC 446327 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || ||||||||||| || || ||||||||| | || | ||||||||||| | Sbjct 446328 AGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 446387 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || || || || || || || | || || || || || | || ||||||| Sbjct 446388 ATCTTGGCCTTTAC--ATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTCT 446445 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || ||||| || || |||||||| Sbjct 446446 TTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476 Score = 114 bits (126), Expect = 8e-21 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || | | |||| |||| || || || || |||||||| Sbjct 448398 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCTAGCTGGTTGCCGGCGAA 448457 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | ||||||||| | || | ||||| ||||| | || || |||||| | Sbjct 448458 GATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTGAC--A 448515 Query 34906 TGCT-ATCGAT-TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || | ||| || || || || || | || |||||||||||||| || ||||| Sbjct 448516 TTCTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTG 448575 Query 34964 ACAAAGATCTGCAT 34977 |||||||||||||| Sbjct 448576 ACAAAGATCTGCAT 448589 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| ||||||||| ||||| ||||| |||| | |||| | || || Sbjct 446496 ACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGGCCGTCTTCT 446555 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||||||||| || |||||||| | || | || |||||||| | Sbjct 446556 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 446615 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || || || || || || || | || || ||||| || | ||| ||||||| Sbjct 446616 ATCTTAGCCTTTAC--ATTCTCGATGGTGTCTGAAGCTTCGACTTCTAGGGTGATGGTCT 446673 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || ||||| || || || |||||||| Sbjct 446674 TGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| ||||||||| ||||| ||||| |||| | |||| | || || Sbjct 448124 ACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGGCCGTCTTCT 448183 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||||||||| || |||||||| | || | || |||||||| | Sbjct 448184 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 448243 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || || || || || || || | || || ||||| || | ||| ||||||| Sbjct 448244 ATCTTAGCCTTTAC--ATTCTCGATGGTGTCTGAAGCTTCGACTTCCAGGGTGATGGTCT 448301 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || ||||| || || || |||||||| Sbjct 448302 TGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || | | |||| |||| ||||| || || || ||||| Sbjct 447685 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCCAGCTGTTTACCAGCGAA 447744 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || || ||||| | || | ||||||||||| | || || || || | Sbjct 447745 GATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCAC--A 447802 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || || || || || | ||| ||||||||||| || || || || Sbjct 447803 TTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTG 447862 Query 34964 ACAAAGATCTGCAT 34977 || || |||||||| Sbjct 447863 ACGAAAATCTGCAT 447876 Score = 82.4 bits (90), Expect = 5e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || | || |||| ||||| |||| || ||||| ||||| ||||| ||| Sbjct 448591 CCTCCACGCAGACGCAATACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 448650 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | |||| |||| || || || || ||||||||||||| | ||||||||| | || Sbjct 448651 AAGGTGCGACCATCCTCTAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 448710 Query 34871 ACCCCCTCCTTGT 34883 | ||||| |||| Sbjct 448711 ATTCCCTCTTTGT 448723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685678930486