Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1030 149 4e-31
seq197 138 7e-28
>seq1030
Length=27445
Score = 149 bits (164), Expect = 4e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| ||||| || | ||||| |||| ||||| ||| |||||||| ||||| |||||
Sbjct 2671 TTACCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCG 2730
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| ||| | || |||| ||||| || || || |||||||||||||| |||||||| |
Sbjct 2731 GACAGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGG 2790
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||||||||| | || || |||||| | | || | || |||||
Sbjct 2791 GGGATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCC 2850
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||| ||| |||||||| ||||| |||||||| || |||||||||||
Sbjct 2851 ACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCAT 2900
>seq197
Length=620651
Score = 138 bits (152), Expect = 7e-28
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | || | ||| |||| ||||| ||| ||||||||||||||| ||||| |||
Sbjct 447878 CCTCCGCGCAGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAT 447937
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || |||||||| || ||||||||||| || ||||||||| | ||
Sbjct 447938 AGGGTGCGGCCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGG 447997
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| ||||||||||| | || || || || || || || | || || || |
Sbjct 447998 ATACCCTCCTTGTCCTGGATCTTGGCCTTTAC--ATTCTCGATGGTGTCCGAAGCTTCAA 448055
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||||||||| || ||||| || || ||||||||
Sbjct 448056 CTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104
Score = 118 bits (130), Expect = 7e-22
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||| ||||||||||| ||||| || ||| |||| ||||
Sbjct 446949 AGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCT 447008
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || ||||||||||| || ||||||||| | || | |||||||||||
Sbjct 447009 TCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 447068
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGC---CTCGACATCAACGGTTAT 34941
| || || ||| || || | ||||| || ||| |||||| |||| || ||
Sbjct 447069 TGGATCTTAGCTTTAAC--AT--TCTCGATAGTATCGGCTGGCTCGACCTCAAGAGTGAT 447124
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || || ||||| || || ||||||||
Sbjct 447125 AGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 114 bits (126), Expect = 8e-21
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| |||| |||||| || ||||| ||||| || | | |||| |||| |||
Sbjct 446268 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCC 446327
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| || || ||||||||||| || || ||||||||| | || | ||||||||||| |
Sbjct 446328 AGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 446387
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
|| || || || || || || | || || || || || | || |||||||
Sbjct 446388 ATCTTGGCCTTTAC--ATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTCT 446445
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || ||||| || || ||||||||
Sbjct 446446 TTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476
Score = 114 bits (126), Expect = 8e-21
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || | | |||| |||| || || || || ||||||||
Sbjct 448398 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCTAGCTGGTTGCCGGCGAA 448457
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| | ||||||||| | || | ||||| ||||| | || || |||||| |
Sbjct 448458 GATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTGAC--A 448515
Query 34906 TGCT-ATCGAT-TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || | ||| || || || || || | || |||||||||||||| || |||||
Sbjct 448516 TTCTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTG 448575
Query 34964 ACAAAGATCTGCAT 34977
||||||||||||||
Sbjct 448576 ACAAAGATCTGCAT 448589
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|| || |||| ||| ||||||||| ||||| ||||| |||| | |||| | || ||
Sbjct 446496 ACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGGCCGTCTTCT 446555
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| ||||| || ||||||||||| || |||||||| | || | || |||||||| |
Sbjct 446556 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 446615
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
|| || || || || || || | || || ||||| || | ||| |||||||
Sbjct 446616 ATCTTAGCCTTTAC--ATTCTCGATGGTGTCTGAAGCTTCGACTTCTAGGGTGATGGTCT 446673
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || || ||||| || || || ||||||||
Sbjct 446674 TGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|| || |||| ||| ||||||||| ||||| ||||| |||| | |||| | || ||
Sbjct 448124 ACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGGCCGTCTTCT 448183
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| ||||| || ||||||||||| || |||||||| | || | || |||||||| |
Sbjct 448184 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 448243
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
|| || || || || || || | || || ||||| || | ||| |||||||
Sbjct 448244 ATCTTAGCCTTTAC--ATTCTCGATGGTGTCTGAAGCTTCGACTTCCAGGGTGATGGTCT 448301
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || || ||||| || || || ||||||||
Sbjct 448302 TGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || | | |||| |||| ||||| || || || |||||
Sbjct 447685 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCCAGCTGTTTACCAGCGAA 447744
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || || ||||| | || | ||||||||||| | || || || || |
Sbjct 447745 GATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCAC--A 447802
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | || || || || || | ||| ||||||||||| || || || ||
Sbjct 447803 TTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTG 447862
Query 34964 ACAAAGATCTGCAT 34977
|| || ||||||||
Sbjct 447863 ACGAAAATCTGCAT 447876
Score = 82.4 bits (90), Expect = 5e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | || | || |||| ||||| |||| || ||||| ||||| ||||| |||
Sbjct 448591 CCTCCACGCAGACGCAATACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 448650
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | |||| |||| || || || || ||||||||||||| | ||||||||| | ||
Sbjct 448651 AAGGTGCGACCATCCTCTAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 448710
Query 34871 ACCCCCTCCTTGT 34883
| ||||| ||||
Sbjct 448711 ATTCCCTCTTTGT 448723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325685678930486
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |