Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq1127 935 0.0 seq986 908 0.0 seq961 217 4e-52 seq960 179 9e-41 seq1102 105 2e-18 >seq1127 Length=20158 Score = 935 bits (1036), Expect = 0.0 Identities = 661/755 (88%), Gaps = 1/755 (0%) Strand=Plus/Minus Query 19045 GTGAGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGGTGCTTCCGAGTTGAA 19104 ||| || ||||||||||| |||||||| ||||||||||||||||||| |||| ||||| Sbjct 5460 GTGGGTTCGGATGTAGGTTATGTCCGTCACCCAACGCTCATCCGGTGAGTCCGGATTGAA 5401 Query 19105 CTGCCGCTGGAGCCTGTTGGGCGTCACGATGCTGGTTTCACCCTTACGTGCCCGTGGGCT 19164 ||||||||||||||||||||| ||||||||||||| ||| || |||||||| |||||||| Sbjct 5400 CTGCCGCTGGAGCCTGTTGGGTGTCACGATGCTGGCTTCGCCTTTACGTGCTCGTGGGCT 5341 Query 19165 ACGGTACCCGACCTGAGCCCTTATCCCGGCACGCTTCATCAGTCGCCAGACACGGTTAAC 19224 ||||||||| |||||||| |||| ||||||||||||||||| |||||||| ||||| || Sbjct 5340 ACGGTACCCAACCTGAGCTTTTATTCCGGCACGCTTCATCAGCCGCCAGACCCGGTTCAC 5281 Query 19225 TCCGCACTGTTGTCCGGTATCCCGCAGGTCGAGGTGGATCTTGCGATAACCATAAACGCA 19284 ||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct 5280 TCCGCACTGCTGTCCGGTATCACGCAGATCGAGATGGATCTTGCGATAACCATAGACGCA 5221 Query 19285 ACCCGACTCCAGCCAGAACTGCTTTATCAGCCCCGTCAGCCTCAGGTCAGCATGATGCCG 19344 || ||||| ||||||||||| || || |||| |||||| || | || | || || || Sbjct 5220 GCCAGACTCAAGCCAGAACTGTTTGATTTGCCCGGTCAGCATCTGATCTGTCTGGTGACG 5161 Query 19345 CCGTGAATCCGGCTGCTGAAGCCAGGCGTAAAAACCACTCGGATGCACATCCAGCACCCG 19404 | | | || ||||||||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct 5160 CTGCGGATGTGGCTGCTGAAGCCAGAAATAAAATCCACTCGGATGGACATCCAGAACCCG 5101 Query 19405 ACAAAGCAGTCGGACAGGCCAGCAATGGGTGTTGTCACGGATAAAGGCGTACCTCAGTCG 19464 ||| |||| || |||||||||||| || ||||||| ||||||||||||||||||||||| Sbjct 5100 ACAGAGCAAACGAACAGGCCAGCAACGGCTGTTGTCGCGGATAAAGGCGTACCTCAGTCG 5041 Query 19465 GACAGCTTTGCGAAGTACGCCGCTG-TAGATTCAATATGTCCCGTTCGTCGGTAACCCGC 19523 ||||||||||||||||||||||| | | || ||||||||||||||||| ||||||||| Sbjct 5040 GACAGCTTTGCGAAGTACGCCGCGGCTTTTTTTAATATGTCCCGTTCGTCCGTAACCCGC 4981 Query 19524 TTCAGCTCTTTCTGGAGGCGTCGGATCTCAGCCTGAGCGTCTGACTGGACTTTATTGGTT 19583 |||| ||||||||| || || |||||||| |||||||| |||||||| | |||| || Sbjct 4980 TTCAACTCTTTCTGAAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCATTATGAGTG 4921 Query 19584 GAGGAATCCGGGCCATATGCCTTTATCCAGGCATAAAGACTGTGGGTGGTGATACCGAGA 19643 || ||||||||||| || |||||||||||| ||||||||||| ||||||||| ||||| Sbjct 4920 GAAGAATCCGGGCCGTACTTCTTTATCCAGGCGTAAAGACTGTGAGTGGTGATATCGAGA 4861 Query 19644 CGTGTTGCCACGCTGGAAACAGAATGGCCGCGATCAACAACCTGTTTTACCGCTTCAATT 19703 |||||||| || |||||||||||||| || ||||||||||||||||| || ||||||||| Sbjct 4860 CGTGTTGCAACACTGGAAACAGAATGACCACGATCAACAACCTGTTTGACTGCTTCAATT 4801 Query 19704 TTAAACTCTTCGGGATAACGCTTACCGCTCATGGGCACCTCTCTTTAAGTCATCTTAAAT 19763 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4800 TTAAACTCTTCAGGATAACGCTTACCGCTCATGGGCACCTCTCTTTAAGTCATCTTAAAT 4741 Query 19764 GACTCTGAGGTGTCTGTTAAACCTGTGGCGATTCA 19798 ||||||||||||||||||||||| ||||||||||| Sbjct 4740 GACTCTGAGGTGTCTGTTAAACCCGTGGCGATTCA 4706 Score = 522 bits (578), Expect = 7e-144 Identities = 361/409 (88%), Gaps = 0/409 (0%) Strand=Plus/Minus Query 18571 TGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTATTC 18630 ||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||| ||||| Sbjct 5933 TGAATCGCCACGGATAATCTAGACACTTCTGAGCCGTTGATAATATAGGTTTTCATATTC 5874 Query 18631 AGTTGGTGGCATATGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCGAT 18690 || |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct 5873 AGCCGGTGGCATCTGCTCGCTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCGAT 5814 Query 18691 GTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCG 18750 |||||||||||||| | | ||||| |||| ||||||||||||| ||||||| ||||| Sbjct 5813 ATAATCAAAAATATCGCTTCTGGCTTCGTCTCTCGTTCCGTAGATCCTTTTCTTAATCCG 5754 Query 18751 TTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCG 18810 ||| |||||||||||||||||||| ||||| || || |||||||| || ||||||||||| Sbjct 5753 TTCGCGTTTCAGTAGCTGGAAAAAGCTTTCCGCAACCGCGTTGTCGTGGCAGTTACCGCG 5694 Query 18811 ACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCTTGT 18870 ||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||| || Sbjct 5693 ACGACTCATGCTGCCTTCCAGACCGTGTGATTTCAGGAACGACTGCCACTCATGGCTCGT 5634 Query 18871 GTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCACAC 18930 ||||||||| || |||||||| |||||||| |||||||||||||||||||| | |||||| Sbjct 5633 GTACTGACTACCCTGATCAGAGTGAACCAGTACCTGCTTTTGAGGATTACGCCTCCACAC 5574 Query 18931 GGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGC 18979 ||||| || | ||| ||||||||||| || |||||||| ||||| ||| Sbjct 5573 CGCCATAAGTAATGCGTTCAGGACAATCTCTTTTGTCATGCGGGGTTGC 5525 >seq986 Length=30461 Score = 908 bits (1006), Expect = 0.0 Identities = 1004/1338 (75%), Gaps = 0/1338 (0%) Strand=Plus/Plus Query 21719 CATTTTATTTCTCTTTTAACAAGTAGCGAGGTCTCTGTTTAACTTCGGTATAAATCCGGC 21778 |||||| || | ||||||| ||||||||| | || |||| ||||||||| | Sbjct 11736 CATTTTTGTTACCCTTTAACAGGTAGCGAGGCCGTCCCTTGCTTTCGATATAAATCCTTC 11795 Query 21779 CAATGTACTCGCCCAAAACTCCGATACCAATGAGCTGCACACCACCGAGAAAAAGTATTG 21838 |||||||||| || | || || || || || || ||||||||||| || ||||| || | Sbjct 11796 CAATGTACTCTCCGAGCACACCAATGCCGATAAGTTGCACACCACCAAGGAAAAGGATGG 11855 Query 21839 ATACCAGCAATGATGGATAACCGCGCACAGGATTCCCGAATGCAAGCGTATCAATGATCA 21898 | || || ||||| ||||| || ||||||| ||| || || || || || || | |||| Sbjct 11856 AGACAAGTAATGACGGATAGCCACGCACAGCATTGCCAAAAGCCAGAGTGTCTACAATCA 11915 Query 21899 TCCAGGCACCGTACAGGAAAGCCAGGCCTGCAACGAACAGGCCAATGTACGTCCACATGC 21958 |||| || || || || || || || |||||||| | || || || || |||||||||| Sbjct 11916 TCCATGCGCCATAGAGAAATGCGAGACCTGCAACAACAAGCCCGATATAGGTCCACATGC 11975 Query 21959 GTAACGGAAATGTTGAGAAGCTGGTAATCCCTTCAAGCGCCAGGTTCCAGAGCTTCCAGC 22018 | | || || || ||||| ||||| || || ||||| || |||||||| | |||||| | Sbjct 11976 GCAGAGGGAAGGTAGAGAAACTGGTGATACCCTCAAGAGCAAGGTTCCATAACTTCCAAC 12035 Query 22019 CATTAAACTTAGTGCTGCCAGCAACACGCTCAGCGCGAGCATATTCAACAACATCTGTAC 22078 ||||||| || || ||||| ||||| || |||||||| ||||||||||||||||| || | Sbjct 12036 CATTAAATTTTGTACTGCCTGCAACGCGTTCAGCGCGGGCATATTCAACAACATCCGTGC 12095 Query 22079 TCCCACCAACCCAGCTCAATACTCCTTTCATGAACAGGTTGCGTTCTGGTAATAATTTAA 22138 |||||||||||||||| ||||| |||||||| ||||| | ||||| | | || | Sbjct 12096 GACCACCAACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTCTCTCTGGCATGAGCTTGA 12155 Query 22139 TGTTTTCCACAACTCCGCGAGACATTAGTCGGAAATCGCCGACGTTCTCCTCAATCTTTG 22198 ||||||| || || | || ||||| || |||||||| ||||| || ||||| |||| | Sbjct 12156 TGTTTTCGACCACCTCACGGGACATCAGACGGAAATCACCGACATTTTCCTCGATCTGCG 12215 Query 22199 GATTGCTTATTTTATTGTGAAGTTTATAGAACCACTCAGCAGTCATGCGCTTCAGTCTTC 22258 | || || ||||| ||||| | |||||||||||||| |||| | || ||||| | | Sbjct 12216 GGTTACTGATTTTGTTGTGCAACTTATAGAACCACTCGGCAGATTTACGTTTCAGACGAC 12275 Query 22259 CGTCTGTAGAACGGTCTGAGCGCTTAGCCAGTACCATATCAGCACCTGCCTGCCACTTTT 22318 || || || ||||| |||||||| ||||||||||| || || || |||||||| || | Sbjct 12276 TATCAGTGGAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGGCCCCGGCCTGCCATTTCT 12335 Query 22319 CAATAAGATGAGGGATAACCTCAATCGGGTCCTGCAGATCGACATCAATAGGAATTACAG 22378 | || ||||| || || |||||||| |||||||||| || || ||||| || || | | Sbjct 12336 CTATCAGATGCGGAATGACCTCAATTGGGTCCTGCAAGTCTACGTCAATCGGGATAATTG 12395 Query 22379 CATCGCCGCTTGCATGGTCTAACCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTG 22438 | || || | || ||||||| || || ||||| || || ||||| ||||||||||| | Sbjct 12396 CTTCACCTGTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCTCTTTTCCAAAGTTGCGGG 12455 Query 22439 TAAATGACAGCGGAACAACTAGCGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTG 22498 | || || || ||||| || ||||| |||| || ||| |||||||| |||||||| || | Sbjct 12456 TGAAGGAAAGAGGAACCACAAGCGGATCTGCAATAGCAAGCGCGTTTATAATTGATTCGG 12515 Query 22499 TGGCATCTTTACTTCCGTCATTTATGAATACAATTTCTACTTCATATGGCTTCAACTCTT 22558 | |||||||| || |||||||| ||||| || || || ||||| | |||| ||| ||| Sbjct 12516 TCGCATCTTTGCTACCGTCATTGATGAAGACTATCTCAACTTCCTGCTGCTTTAACCCTT 12575 Query 22559 GGAATTCACGTACCGTTTTATAGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGAA 22618 || || || || | ||| ||||| | || || ||||| |||||||| || || |||| Sbjct 12576 CAAACTCCCGCACGGCTTTGTAGAAGATTGGAATTGCTTCCTCTTCATTAAACACCGGAA 12635 Query 22619 CGACAAGAGATATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGACGAAACC 22678 |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 12636 CGACCAGAGAAATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGATGAAGCC 12695 Query 22679 GCACACCAGACTGATGGCGGAGAAGGTGATAAGAGTGACTATTGGAGGAAGTGAGCATTT 22738 |||||||||||||||||||||||| ||| | || | || || | ||| |||| Sbjct 12696 GCACACCAGACTGATGGCGGAGAAAACGATTAACGTAATAATCGGGGCAAGCCCTGATTT 12755 Query 22739 ATCAGCTGCCCAACCAACAATCACACTCAATATTCCCATAAATCCCACGTATAACATGTA 22798 ||||| ||||||||| | |||| | |||||||| || || || | |||||| Sbjct 12756 GTCAGCACACCAACCAACGGCGGCGCTCAGCGTACCCATAAACCCTACATACAGCATGTA 12815 Query 22799 GCGCATCGCTGTAGTCGATGCTTTGAATGTGAATCTTGCATTCGCGAAGAAGCTAAAGCT 22858 |||||| | || || || | || || ||||| || || || ||||| |||||||| Sbjct 12816 GCGCATGGTCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTTTGCGAAAAAGCTAAATGA 12875 Query 22859 CACAGCCACTACGAAACCTGTGAAGTTTGCCAGAGCCTGACTGGTATGTGCGGCATAGAT 22918 ||| || ||||| || || | |||||| |||||||| || | || || | | || || Sbjct 12876 CACCGCAACTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCCTGTGTGGAAGACGTAAAT 12935 Query 22919 ACATACACCAAAAACCACCCAGTGTATAAGTGTGTTCAGCACACCTATAGATGTGTACTT 22978 | | | | || || |||||||| || || ||||| | |||||||| ||||||||| | Sbjct 12936 AGAAATGGCGAACACAACCCAGTGAATGAGCGTGTTGATAACACCTATTGATGTGTACCT 12995 Query 22979 TACAAATAACTTTAACATTTATTTAATCAATGAGCTCTGAAAGGCATGAAGTCTATCATC 23038 | ||||||||||||||| ||||| ||| || |||||| |||||| || |||| Sbjct 12996 GGCGAATAACTTTAACATTATAGAAATCAGTGAATTCGGAAAGGTCTGAAGTGTAGCATC 13055 Query 23039 CAAGTCTCAATTGATCGA 23056 | || |||||||| Sbjct 13056 ACACATGCACTTGATCGA 13073 >seq961 Length=33037 Score = 217 bits (240), Expect = 4e-52 Identities = 332/471 (70%), Gaps = 4/471 (1%) Strand=Plus/Plus Query 18659 TGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGAGCTTCT 18718 || || || ||| |||||| ||||| ||||||||||| |||||||||| || |||||| Sbjct 15048 TGTCGGCGTTTAGGGTTATAGAACATCTCGATGTAATCGAAAATATCACTTCGGGCTTCT 15107 Query 18719 TCTCGCGTTCCGTAGATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAAAAACTT 18778 || || ||| |||||||||| || || || || |||| ||||||||||| || Sbjct 15108 TCACGGGTTGTGTAGATCTTTCGTCGGATTCGCTCTCGCTTCAAAAGCTGGAAAAAGCTC 15167 Query 18779 TCTGCGACTGCGTTGTCATGACAGTTACCGCGACGGCTCATACTGCCCTCCAGCCCGTGT 18838 || || || || ||||| || ||||| || || |||||||| |||| | || Sbjct 15168 TCGGCTACGGCATTGTCGTGGCAGTTTCCCCGCCGGCTCATGCTGCTGATTACATTGTTG 15227 Query 18839 GATTTCAGGAACGACTGCCACTCATAGCTTGTGTACTGACTGCCTTGATCAGAATGAACC 18898 | |||| || | ||| || |||| || |||||||||||||||| || |||| | Sbjct 15228 GCCTTCAAAAAGCTTTTCCAATCCGAGCTACTGAACTGACTGCCTTGATCTGAGTGAATC 15287 Query 18899 AGCACCTGCTTTTGAGGATTACGTCGCCACACGGCCATCAGAAGTGCATTCAGGACAATA 18958 | || |||| ||||| || |||||||| || ||||||| | || | | | | Sbjct 15288 ATAACTTGCTGCTGAGGCTTGCGTCGCCAAACAGCCATCAACATCGCGTCGATAGCCAGG 15347 Query 18959 TCCTTTGTCATCCGGGGCTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACA 19018 || | ||||| |||| ||||||||| ||||| |||| ||| |||||||| || | Sbjct 15348 TCGCTGCACATCCTTGGCTTCATTGACCAACCAATTACTTGGCGTGAGAACAGATCCAGC 15407 Query 19019 ACCACAGCCAGATACAGCCAGCCTTCGTGAGTCCGGATGTAGGTGATGTCCGTTACCCAA 19078 || || || || || ||||| ||||| | || |||||||| ||||| || || ||||| Sbjct 15408 ACTACCGCGAGGTAGAGCCACCCTTCATAGGTGCGGATGTAAGTGATATCTGTCACCCAG 15467 Query 19079 CGCTCATCCGG--TGCTTCCGAGTTGAACTGCCGCTGGAGCCTGTTGGGCG 19127 || | ||| ||| | |||||||||||| ||| |||||||| Sbjct 15468 ACCTTGTTCGGCTCACTTAC--CTTGAACTGCCGCGCGAGGTGGTTGGGCG 15516 >seq960 Length=33163 Score = 179 bits (198), Expect = 9e-41 Identities = 328/476 (69%), Gaps = 6/476 (1%) Strand=Plus/Plus Query 8778 CGGTTCACGATGACCGAACAACAGACCCTGCTGTCTCATGGCGTGGCAACGGCGTATGTC 8837 || ||||| ||||||| | ||| | ||||| | ||| | || || || || | Sbjct 18284 CGTTTCACCCTGACCGAGCGCCAGTCGCTGCTCAACTACGGCATCGCCACCGCCTACTAC 18343 Query 8838 GAAAGCGGGGTAC-TGCGCATTCAGCGTGATGTCACCACGTACAGGAAAAACGCTTACGG 8896 ||| |||| ||| ||||||| |||||| |||| || ||| ||| ||||||| ||| Sbjct 18344 GAAGGCGGC-TACGTGCGCATCCAGCGTTCGATCACTACCTACCAGAAGAACGCTTTCGG 18402 Query 8897 GGTTGCGGATAACAGCTACCTCGACAGCGAGACGCTGCATACCAGC--GCGTATGTACTG 8954 ||||| ||| |||||| ||||||||||| ||||| |||| || || | || Sbjct 18403 CCAGGCGGACAACTCCTACCTGGACAGCGAGACCCTGCA--CCAGTCGGCCTACATCGTG 18460 Query 8955 CGCAAACTGAAATCCGTCATTACCAGTAAGTACGGGCGTCACAAGCTTGCCAGTGACGGT 9014 ||| ||| || ||| || ||||| ||||||||||| |||||| | ||| || || Sbjct 18461 CGCCGCCTGCAAAGCGTGATCACCAGCAAGTACGGGCGCCACAAGTTGGCCGCCGATGGC 18520 Query 9015 ACCCGCTTTGGTCCCGGTCAGGCGATTGTCACCCCGGCGGTGATCAAAGGGGAACTGCTG 9074 |||||||| || |||| ||| |||| ||||||||| || || || ||| | Sbjct 18521 ACCCGCTTCGGCGCCGGCCAGCCGATCGTCACCCCGAGCACCATTCGCGGCGAGCTGATC 18580 Query 9075 GCAACCTACCGTCAGCTTGAGCGAGCGGGGATCGTGGAAAACTACGAACTGTTTAAGCAG 9134 || ||| |||| |||| | || ||||||||| ||| ||||| || Sbjct 18581 GCCCAGTACGCCAAGCTGGAGCTGGAAGGCCATGTGGAAAACGCCGAGCTGTTCGCCGAG 18640 Query 9135 TACCTGGTTTTGGAGCGTGATGCCAGCGATCCGAACCGCCTGAACACGCTGTTCCCGCCT 9194 ||||||| |||| || |||||| | || ||||||||| | ||| |||||||||||| Sbjct 18641 CACCTGGTGGTGGAACGCGATGCCCGGGACCCGAACCGCATCAACGTGCTGTTCCCGCCG 18700 Query 9195 GACTATGTTAACCAGTTGCGTGTCTTTGCCGTGGTTAACCAGCTCCGTCTTCAGTA 9250 ||||| | ||| |||| || || || || | |||||| |||| || ||||| Sbjct 18701 GACTACATCAACGGCCTGCGAGTGTTCGCGCTGCTCAACCAGTTCCGCCTGCAGTA 18756 >seq1102 Length=22075 Score = 105 bits (116), Expect = 2e-18 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 23198 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAATAAG 23257 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215 Query 23258 TTA 23260 ||| Sbjct 2214 TTA 2212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127101292208160