Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_022768.1 Length=154701 Score E Sequences producing significant alignments: (Bits) Value seq974 87.8 2e-12 >seq974 Length=31311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 241/364 (66%), Gaps = 8/364 (2%) Strand=Plus/Minus Query 103239 TCTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGT 103298 ||| || || || |||||||| ||||| || ||||||||||| || ||||| || || || Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301 Query 103299 TCTTATCAAAACCGGTGACACTTTGGACTCGATCAATGCTACAGCCAAAAGTATTGTTGA 103358 || ||| | ||||||| |||| || ||||| || || ||| || || | Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241 Query 103359 TTATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAG 103418 || || ||| | || || || ||||| | | | ||| || |||| | || || Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAG 181 Query 103419 CCCTATCCGAAAAGGTGAAATGGTGCACACAGGCCTGGTTCCTTTC-ATAA--AATATCT 103475 ||| || || |||||| | ||||| ||| | || ||| |||| | | | Sbjct 180 CCCGATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCACTTCCA 121 Query 103476 GACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGC-AACTTGCT 103534 ||| ||| |||| || |||||||| ||||| | || ||||| | || | | || | Sbjct 120 GAC---GGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTT 64 Query 103535 ATATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTC 103594 || |||||| ||||| || | || | |||||||||| |||||||||||| Sbjct 63 CTA-CCCTATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCGTGGTG 5 Query 103595 TTGA 103598 |||| Sbjct 4 TTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494904101526640