Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_022772.1
Length=156338
Score E
Sequences producing significant alignments: (Bits) Value
seq974 86.0 6e-12
>seq974
Length=31311
Score = 86.0 bits (94), Expect = 6e-12
Identities = 242/365 (66%), Gaps = 10/365 (3%)
Strand=Plus/Minus
Query 104944 TCTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGT 105003
||| || || || |||||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301
Query 105004 TCTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGA 105063
|| ||| | ||||||| |||| || ||||| || || ||| || || |
Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241
Query 105064 TTATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAG 105123
|| || ||| | || || || ||||| | | | ||| || |||| | || ||
Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAG 181
Query 105124 CCCTATCCGAAAAGGTGAAATGGTGCACACAGGTCTGGTTCC--TTTCATAA--AATATC 105179
||| || || |||||| | ||||| || ||| ||| || |||| | | |
Sbjct 180 CCCGATTCGCGGCGGTGAAGCATTCCACACCGG-CTGTATCCCGTTCTATAAGCACTTCC 122
Query 105180 TGACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGC-AACTTGC 105238
||| ||| |||| || |||||||| ||||| | || ||||| | || | | ||
Sbjct 121 AGAC---GGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGT 65
Query 105239 TATATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGT 105298
| || |||||| ||||| || | || | |||||||||| ||||||||||||
Sbjct 64 TCTA-CCCTATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCGTGGT 6
Query 105299 CTTGA 105303
||||
Sbjct 5 GTTGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500142384055520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |