Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq813 100 8e-17 >seq813 Length=55966 Score = 100 bits (110), Expect = 8e-17 Identities = 184/269 (68%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 23455 ACCACAATTTCGGTGGTGTAGTTGGTCGCGCCGTCTTTTTC---CCACTTGCGTGTCTGC 23511 ||||||| |||||||||||| || |||||| | || ||| || || || || Sbjct 13473 ACCACAACTTCGGTGGTGTACTTCTCAGCGCCGGACTGATCGGTCCATTTACGGGTGCGC 13532 Query 23512 AGCTTGCCGATGATCGCGCATTCACTTCCCTTGCGCAGATACTCGCCGGCAATCTCGGCG 23571 || | ||| ||| | | | || || ||||||||||| ||||||| || || Sbjct 13533 AGTTGGCCTTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCC 13592 Query 23572 ACCTTGCCGAAGAACACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGC 23631 | ||||| || | ||| |||||||||||||| |||| || || ||| |||||| Sbjct 13593 AGTTTGCCAAACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCT 13652 Query 23632 TTGTCCTTCCAGGTTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGC 23691 || || ||||| ||| || || ||||| | |||||| || || | || | || Sbjct 13653 TTATCACGCCAGGATTCGGAAGTAGCCAGCGTAATGTTGGCAACTGCGCCACCACTCGGC 13712 Query 23692 AGGTAGCGCACTTCCGGGTCATTACCCAG 23720 | |||||| ||||||||||| | ||||| Sbjct 13713 ATGTAGCGTACTTCCGGGTCCTGGCCCAG 13741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139280232745528