Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023555.1
Length=43017
Score E
Sequences producing significant alignments: (Bits) Value
seq960 96.9 1e-15
>seq960
Length=33163
Score = 96.9 bits (106), Expect = 1e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 6145 AAGGGCGTATTATCCGAGTACCAAGTAACTATGACCCAGACACCCGCACCTATTCCGGCA 6204
||||||| || ||||| || ||||| ||||| || || | |||||| ||||| ||||
Sbjct 13029 AAGGGCGGATCATCCGCGTGCCAAGCAACTACGATCCGGCCACCCGGACCTACAGCGGCG 13088
Query 6205 ATTGGGATGGGTCGTTTAAATGGGCCTACACCAACAATCCGGCGTGGGTATGGTACGACG 6264
||||| || | || || | ||||| ||| |||| ||||| ||| | | ||||||
Sbjct 13089 TGTGGGACGGCACCTTCAAGTCGGCCTGGACCGACAACCCGGCCTGGATCTACTACGACC 13148
Query 6265 TATTGACTCAACCGCGGTTCGGGCTTGGTAAGC-GCGTTACGGCGGCCATGCTAGATAAA 6323
| || || | ||| | || || || | | || ||| || ||| | | || ||
Sbjct 13149 TGCTGCTGCACCAGCGTTATGGCCTCGGGCACCTGCTCAACGCCGCCCAGG-TGGACAAG 13207
Query 6324 TGGGAGTTGTACCGCATCGCACAGCGCTGCGATCAGATGGTGCCGGATGG 6373
|||||| |||||||||||| ||| |||||| ||| |||| | |||||
Sbjct 13208 TGGGAGCTGTACCGCATCGGCCAGTACTGCGACCAGCCGGTGTCCGATGG 13257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137529870035612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |