Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_023555.1 Length=43017 Score E Sequences producing significant alignments: (Bits) Value seq960 96.9 1e-15 >seq960 Length=33163 Score = 96.9 bits (106), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 6145 AAGGGCGTATTATCCGAGTACCAAGTAACTATGACCCAGACACCCGCACCTATTCCGGCA 6204 ||||||| || ||||| || ||||| ||||| || || | |||||| ||||| |||| Sbjct 13029 AAGGGCGGATCATCCGCGTGCCAAGCAACTACGATCCGGCCACCCGGACCTACAGCGGCG 13088 Query 6205 ATTGGGATGGGTCGTTTAAATGGGCCTACACCAACAATCCGGCGTGGGTATGGTACGACG 6264 ||||| || | || || | ||||| ||| |||| ||||| ||| | | |||||| Sbjct 13089 TGTGGGACGGCACCTTCAAGTCGGCCTGGACCGACAACCCGGCCTGGATCTACTACGACC 13148 Query 6265 TATTGACTCAACCGCGGTTCGGGCTTGGTAAGC-GCGTTACGGCGGCCATGCTAGATAAA 6323 | || || | ||| | || || || | | || ||| || ||| | | || || Sbjct 13149 TGCTGCTGCACCAGCGTTATGGCCTCGGGCACCTGCTCAACGCCGCCCAGG-TGGACAAG 13207 Query 6324 TGGGAGTTGTACCGCATCGCACAGCGCTGCGATCAGATGGTGCCGGATGG 6373 |||||| |||||||||||| ||| |||||| ||| |||| | ||||| Sbjct 13208 TGGGAGCTGTACCGCATCGGCCAGTACTGCGACCAGCCGGTGTCCGATGG 13257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137529870035612