Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023561.1
Length=173276
Score E
Sequences producing significant alignments: (Bits) Value
seq236 114 1e-20
seq637 113 5e-20
>seq236
Length=545527
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 61347 TTAAGTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACG 61406
|| ||| || || || | |||||||||||||| || ||||| || |||| || || ||
Sbjct 30886 TTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCG 30827
Query 61407 AACGGCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGC 61466
|| ||||| ||||| || ||||| |||||||| || ||||||||||| || | ||| ||
Sbjct 30826 TACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGC 30767
Query 61467 ATCTTCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAACTTT 61526
|| | ||||| ||| ||||| ||||| | ||||| |||||||| ||
Sbjct 30766 GTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCACGCG 30707
Query 61527 AACTGTAGGCTTGGTTTCAATTCCAATTTCACG 61559
||| ||||| ||| ||| |||||||||
Sbjct 30706 CACTTCTGGCTTCACTTCCATTGGAATTTCACG 30674
>seq637
Length=122170
Score = 113 bits (124), Expect = 5e-20
Identities = 159/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 61301 TGTGCGGCTTGTAACCTTTGATATCT-TCAATTGACATTACATTTCCTTAAGTGAAAGTG 61359
||| || ||| |||| |||| || |||||| |||||| || | ||||||||
Sbjct 107069 TGTACGCCTTTTAACGCGTGATTTCAGTCAATTCCACTTACATGGACTGA-GTGAAAGTA 107127
Query 61360 CGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACGGCATAGCCA 61419
|| | |||||||| |||| || ||| ||| || | |||||||| || || ||||||
Sbjct 107128 CGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACGTACTGCGTAGCCA 107187
Query 61420 GAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTTCTAAAGTT 61479
|| ||||| || ||||||||||||||||| || ||||||| | ||||| | ||
Sbjct 107188 GATACACGGATGGTCAGCTGAGGATATTTCTCAGGATGTTCCATCGCATCGAGCAGCATT 107247
Query 61480 TCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520
|| || ||||||||||||| ||||| ||||||||
Sbjct 107248 TCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACCTTC 107288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554342768584640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |