Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq236 114 1e-20 seq637 113 5e-20 >seq236 Length=545527 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 61347 TTAAGTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACG 61406 || ||| || || || | |||||||||||||| || ||||| || |||| || || || Sbjct 30886 TTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCG 30827 Query 61407 AACGGCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGC 61466 || ||||| ||||| || ||||| |||||||| || ||||||||||| || | ||| || Sbjct 30826 TACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGC 30767 Query 61467 ATCTTCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAACTTT 61526 || | ||||| ||| ||||| ||||| | ||||| |||||||| || Sbjct 30766 GTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCACGCG 30707 Query 61527 AACTGTAGGCTTGGTTTCAATTCCAATTTCACG 61559 ||| ||||| ||| ||| ||||||||| Sbjct 30706 CACTTCTGGCTTCACTTCCATTGGAATTTCACG 30674 >seq637 Length=122170 Score = 113 bits (124), Expect = 5e-20 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 61301 TGTGCGGCTTGTAACCTTTGATATCT-TCAATTGACATTACATTTCCTTAAGTGAAAGTG 61359 ||| || ||| |||| |||| || |||||| |||||| || | |||||||| Sbjct 107069 TGTACGCCTTTTAACGCGTGATTTCAGTCAATTCCACTTACATGGACTGA-GTGAAAGTA 107127 Query 61360 CGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACGGCATAGCCA 61419 || | |||||||| |||| || ||| ||| || | |||||||| || || |||||| Sbjct 107128 CGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACGTACTGCGTAGCCA 107187 Query 61420 GAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTTCTAAAGTT 61479 || ||||| || ||||||||||||||||| || ||||||| | ||||| | || Sbjct 107188 GATACACGGATGGTCAGCTGAGGATATTTCTCAGGATGTTCCATCGCATCGAGCAGCATT 107247 Query 61480 TCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520 || || ||||||||||||| ||||| |||||||| Sbjct 107248 TCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACCTTC 107288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554342768584640