Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023568.1
Length=246964
Score E
Sequences producing significant alignments: (Bits) Value
seq974 131 3e-25
seq962 104 4e-17
>seq974
Length=31311
Score = 131 bits (144), Expect = 3e-25
Identities = 271/397 (68%), Gaps = 10/397 (3%)
Strand=Plus/Minus
Query 78628 TTCTACAATGCAGTTTCGACTCACAAACTTTCATTACCGACACCGATTATGGCAGGCGTT 78687
|||||| |||| || ||||| ||| |||| | || || || || ||| | |||||
Sbjct 392 TTCTACGATGCGGTATCGACGTTCAAGATTTCTCTGCCTACGCCAATCATGTCTGGCGTG 333
Query 78688 CGTACCCCGACACGCCAGTTTAGTTCGTGTGTTAAGATTGAATCAGGCGACTCTTTGCAT 78747
|| ||||| || || ||||| || || || || ||| || | || ||| || ||
Sbjct 332 CGCACCCCAACCCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGTGGTGACAGCCTGGAT 273
Query 78748 TCAATCAATGAAGTGGCTAAATCAATTGTAAGTTACATTAGTAAGCGTGCAGGTATCGGT 78807
|| ||||| | | | | | || || | ||| || ||||||| ||||||||
Sbjct 272 TCCATCAACGCCACGTCCAGCGCCATCGTGAAATACGTTTCCCAGCGTGCCGGTATCGGC 213
Query 78808 GTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAGTCG--TTCGTTCAGGTGAG--ATTCG 78863
| |||| |||| || ||||| |||||| | |||| ||||| ||||
Sbjct 212 ATCAACGCCGGTCGCATCCGTGCGCT--GGGCAGCCCGATTCGCGGCGGTGAAGCATTC- 156
Query 78864 TCACACTGG-TGTAATTCCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTCTC 78922
||||| || |||| | || |||| || ||||| || || ||||| ||||| || ||||
Sbjct 155 -CACACCGGCTGTA-TCCCGTTCTATAAGCACTTCCAGACGGCGGTAAAATCCTGCTCTC 98
Query 78923 AAGGTGGTGTACGTGGGGGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGTTG 78982
| || || || || || ||||||||||| || ||||| || |||||| | ||||| |
Sbjct 97 AGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCTATGTGGCACCTGGAAGTGG 38
Query 78983 AAAAACTGTTAGTTCTGAAGAACAACAAAGGTGTTGA 79019
||| ||| | || ||||| |||||| ||||||||
Sbjct 37 AAAGCCTGCTGGTCCTGAAAAACAACCGTGGTGTTGA 1
>seq962
Length=32987
Score = 104 bits (114), Expect = 4e-17
Identities = 197/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 188168 TGGAAAGAACTGACGGGCTACGGTTTCAGTCTGTACAGTACACCAAGTGAATCGCTGTGT 188227
|||||||| || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 24492 TGGAAAGAGGAAACCGGCTACGGTTTCAGCCTGTACAGTACCCCAAGCGAGAACCTGTGC 24433
Query 188228 GATCGTTTCTGTCGTCTCGACCAAGAGAAATACGGTGTCATTACAGGTATCAATGACAAA 188287
|| || ||||| ||||| ||| | | | ||| || | ||| | | || |||
Sbjct 24432 GACCGCTTCTGCCGTCTGGACACCGCCGAGTTCGGCATCGTGGAAGGCGTGACCGATAAA 24373
Query 188288 GACTATTACACAAACTCGTTTCACTTAGACGTGTTCAAGAAAGTTAACCCATTTGAGAAA 188347
| || ||||| ||| || ||| | |||||| ||||| || ||||| | || ||
Sbjct 24372 GGTTACTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGGTAAACCCGTACGACAAG 24313
Query 188348 ATTGATTTTGAAGCTGCATACCCAATTCATGCAAACGGTGGTTTCATCTGTTATGCTGAG 188407
|| || |||||||| || || || || ||||| || |||||||| || | |||
Sbjct 24312 ATCGACTTTGAAGCGGCGTATCCGCCGATCGCCAACGGCGGCTTCATCTGCTACGGCGAG 24253
Query 188408 TTCCCGAATATGCGAGATAACATCAAAGGTCTAGAGCGCGTATGGGATTA 188457
| |||||| || | | ||| | || | || || ||| ||||||||
Sbjct 24252 TACCCGAACATTCAGCACAACCTGAAGGCGCTGGAAGACGTGTGGGATTA 24203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790139080733760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |