Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023574.1
Length=128546
Score E
Sequences producing significant alignments: (Bits) Value
seq1512 172 5e-38
>seq1512
Length=4801
Score = 172 bits (190), Expect = 5e-38
Identities = 133/154 (86%), Gaps = 3/154 (2%)
Strand=Plus/Plus
Query 28233 CAATTAAAAGCAGAAATCAATAAAA-AATATCACTTAATGCTTGATaa-aaaaaTAATAT 28290
|||||||||| |||||| ||||||| ||||||| |||| |||| || | ||| | ||
Sbjct 110 CAATTAAAAGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAACGATAATTA-AT 168
Query 28291 TTTGATATAATAATATGTATAGAAATAAAGGAGAACTAACACATGGTAGTTAAATTAACA 28350
|||| ||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct 169 TTTGGTATAATAGTATATATAGAAATAAAGGAGAACTAACAAATGGTAGTCAAATTAACG 228
Query 28351 CAAAAACAAGATGATTATCTTAAAACTTTTGGAA 28384
|||||||||| |||||||||| ||||||||||||
Sbjct 229 CAAAAACAAGCTGATTATCTTGAAACTTTTGGAA 262
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/225 (70%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 28507 AAAATGCTAAATGCTCTAATTAACGGTTATGAAGTTGATGAACCTAAATATAAATTTTAT 28566
|||||| | | ||| | |||||||||||||||||| ||||||||||| ||| ||||||
Sbjct 385 AAAATGGTTGAAGCTGTCATTAACGGTTATGAAGTTATTGAACCTAAATTTAAGTTTTAT 444
Query 28567 ACATGTCGTGA----AACCTCATATCTGCCTTTATACTATTCTGGAAAGCATAATGCATT 28622
| | | ||| | | | ||| | ||||| ||| ||||| || ||| |||
Sbjct 445 AACTTTTCTGATAGTAGCGGAGGAACTG-CATTATATTATGCTGGACAGTCTAAACAATT 503
Query 28623 AACACTATGTGAAGATAAAGCTCTTGAATTTGAAAAAGGAAGTAAAGGATATTTAGCTTT 28682
|||| || || | | ||||||||| || || | || || | | |||| ||||||
Sbjct 504 AACAAAATTCGAGCAAGATGCTCTTGAAGTTAAAGAGGGGAGCGAGGAATATAAAGCTTT 563
Query 28683 AGAATATTTAGGTTTTTGTAAAGAAAAAGCATGATAAAATCTTTT 28727
| ||||||||| | ||||| ||| ||||||| |||||||
Sbjct 564 GTTAGCTTTAGGTTTCGTTGAAGAAGAAGTATGATAACATCTTTT 608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 411213408879238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |