Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023588.1
Length=33525
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 325 8e-85
>seq1001
Length=29257
Score = 325 bits (360), Expect = 8e-85
Identities = 1072/1631 (66%), Gaps = 123/1631 (8%)
Strand=Plus/Plus
Query 15837 CGCACCCCATAACCGCAGGAGTTCC-CTCATGGCCACCGACTACCACCACGGCGTACGCG 15895
|||||||| ||||| | |||||| | |||| | ||||| || |||||||| |
Sbjct 6670 CGCACCCCTTAACCAC-GGAGTTAAACAGATGGGC---GACTATCATCACGGCGTCGAGG 6725
Query 15896 TCATCGAAATCAACGGCGGCGTGCGTCCGATCCGCACTGTGGCCACCGCTATCGTCGGCG 15955
||||||| || |||| ||| ||| | || ||| || | || || ||| |||||
Sbjct 6726 TCATCGAGATTAACGATGGCACGCGCACCATTTCCACCGTTTCGACGGCCATCATCGGCA 6785
Query 15956 TCGTCTGCACCGCGCAG-GACGCAGACGCCACGCTGTTCCCCCTCGACCGACCGGTGCTG 16014
| |||||||| || ||| || || ||||| | | |||||| | || ||||| |||
Sbjct 6786 TGGTCTGCACGGC-CAGCGATGCTGACGCAAAGACATTCCCCTTAAACGAGCCGGTACTG 6844
Query 16015 CTGACCGACGTGCTGGGCGCCGTCGGCAAGGCCGGCACCAGCGGCACGCTGCGCGCCA-C 16073
| | | ||||| || |||| || ||||| | | ||||||||| || | |
Sbjct 6845 ATTAACAGCGTGCAAACGGCTATCGGTAAAGCCGGTAAAAAAGGCACGCTG-GCAAAATC 6903
Query 16074 GCTGCAGGCCATTGCCGACCAG-GCCAAC--GCCATTACCGTGGTGGTGCGCGTCACCGA 16130
||||||||||| ||||||||| || ||| | |||| |||||||||||||| | ||
Sbjct 6904 CCTGCAGGCCATCGCCGACCAGTGCAAACCGGTCATT---GTGGTGGTGCGCGTTCCAGA 6960
Query 16131 AGGTTCCGACGAC--------------AGCGCC----------ACCACCGCCAACGTGAT 16166
|||| ||||||| |||| | |||| ||||| | ||
Sbjct 6961 AGGTGTCGACGACCCGGCAGACCCGGAAGCGGCGCAGAAAGAAACCATTTCCAACATCAT 7020
Query 16167 CGGCAAGAAGGACGG---CGCCACCTTCACCGGCATGCAGGCGCTGCTGGTGGCTGAGGC 16223
||||| || |||| || || | |||||| || | |||||| | ||| | |
Sbjct 7021 CGGCACGACCGACGAAAACGGCAAATACACCGGGCTGAAAGCGCTGTTAACGGCGAAAAC 7080
Query 16224 GCAGGTAGGCGTGCGTCCGCGCATCCTCGGCGCACCCGGTCTGGACACCCAGCCGGTTTC 16283
||||| |||||||| ||||||| || || ||||| || ||| || |
Sbjct 7081 CGTCACCGGCGTTAAGCCGCGCATTCTCGGCGTGCCGGGGCTGGATACGCAGGAAGTGGC 7140
Query 16284 GGCCGCACTGGCGGTCATC--GCCAAGAAGCTGCGCGCGATGGCCTACGTGAGCT----G 16337
| |||| || ||| ||| | |||| || ||||||||| | | |||||| ||| |
Sbjct 7141 GACCGCGCTTGCG-TCAACCTGCCA-GAGCCTGCGCGCGTTCGGCTACGTAAGCGCGTGG 7198
Query 16338 TGCCGCCAGTGCCTCGGTCAGCGAGGCCATCGCCTATCGCGAGCAGTTCAGCCAGCGCGA 16397
|| || || | | || ||| |||||| || || ||| | ||||||||||||||
Sbjct 7199 GGCTGCAAGACCATT--TC--CGACGCCATCAAATACCGTGAGAATTTCAGCCAGCGCGA 7254
Query 16398 GCTGATGCTGATCTATCCCGACTTCGTCGCGTT---CAACACTGCCGACGCCACCACCA- 16453
||||||| | || | || ||||| | || | || ||| || ||| ||| |
Sbjct 7255 GCTGATGGTCATTCACCCTGACTTTCTGGCATGGGACACCACGGCGAACGAAACCGATAT 7314
Query 16454 -GCATGGCGTTCGCGACCGCCCGCGCCCTGGGCCTGCGCGCGATGATCGATGAGCAGCAG 16512
|||||| |||||||||||||| || ||||||||||| | ||||| || ||
Sbjct 7315 TGCATGG-----GCGACCGCCCGCGCGCTCGGCCTGCGCGCCAAAATCGACCAGGAGACC 7369
Query 16513 GGCTGGCACAAATCGATCTCCAATGTGGCCGTCGCCGGCGTGACCGGCATCAGCCGCGAC 16572
|| ||||||||| || | || || || | ||| ||||| |||||| |||| ||| |
Sbjct 7370 GGATGGCACAAAACGCTGTCTAACGTTGGCGTGAATGGCGTCACCGGCGTCAG-CGCCTC 7428
Query 16573 GTGCAC-TGGGACCTGCAAGATCCGGCGACCGACGCTGGCCTGCTGAACGCCGCCGACAT 16631
| | | ||||| |||| || | ||| |||||||| ||||||||| |||| |
Sbjct 7429 GGTCTCATGGGATTTGCAGGAGCAGGCTACCGACGCCAACCTGCTGAATCAGGCCGGGGT 7488
Query 16632 CACCACCCTCATCAACTCCAACGGTTACAAGTTCTGGGGTTCGCGGACCTGCAGCGACGA 16691
|| || || ||| | | |||| | ||||||||||| || |||||| |||||
Sbjct 7489 GACAACGCTAATCCGCAACGACGGCTTTAAGTTCTGGGGCAACCGTACCTGCTCGGACGA 7548
Query 16692 CCCGCTGTTCGCCTTCGAGACGGCCACGCGCACCGCGCAGATCCTGGCCGACACCATTGC 16751
|| | |||| || || | ||| ||||| |||||| | ||||||||||| || ||
Sbjct 7549 TCCTTTATTCGTGTTTGAAAACTACACCCGCACGGCGCAGGTGCTGGCCGACACGATGGC 7608
Query 16752 CGAGGCGCAGATGGTGTACATCGACAAGCCCGAGCATCCG--TCGCTCATCCGCGACATG 16809
|||||||| | | || ||||||||| | |||| |||| |||||||||||
Sbjct 7609 GGAGGCGCACGCGTGGGCGATGGACAAGCCC--GTTTCCGCAACGCTTATCCGCGACATT 7666
Query 16810 CTGGAGAGCATCAATGCCAAGTTCCGCGAGCTGGTGAACGCCGGCTA---CGTGGCTGGT 16866
| | | ||||||||||| |||||||||||| || |||||| ||| | ||
Sbjct 7667 GTCGCCGGTATCAATGCCAAATTCCGCGAGCTGAAAAATAACGGCTATATCGTTGACGGG 7726
Query 16867 GCATCGCT-GTACGACGAGCGGCCAACGAGCCCAGCCA-GCTG-AGGCTGG---GGTGAC 16920
||| ||| ||||||| | | ||| | | | | ||| | || || | ||
Sbjct 7727 TCAT-GCTGGTACGACCCGGAGTCAAACACCGTGGAAACCCTGAAAGCCGGGAAGCTGTA 7785
Query 16921 AATCGACTACGACTACACGCCGGTACGCCCGCTGGAGAACCTGGTCCTGAACCAGCGCAT 16980
||||| ||||||||||| || || | |||||||| |||||| |||| |||||||||
Sbjct 7786 TATCGATTACGACTACACCCCCGTCCCGCCGCTGGAAAACCTGACCCTGCGCCAGCGCAT 7845
Query 16981 CACCGACCGCTACTTCGCCGAC--TTCCCGGCCGTATCAACGGCTGATGCCGTACTGAGG 17038
|||||| ||| | || ||| || | || ||||| ||| | | || ||
Sbjct 7846 CACCGATACCTATCTGGCTGACCTGTCAGAGTCG-GTCAACAGCTAA---GGAGCTCAGA 7901
Query 17039 AACCATTCCCATGTCCATGCCCAGCAAGCTCAAGAATCTCAACCTGTTCAACGACGGCCT 17098
| |||| | | || |||| || || | || || |||| |||||||||||
Sbjct 7902 A--------CATGGCGTTACCACGCAAACTGAAATACCTGAATATGTTTAACGACGGCCT 7953
Query 17099 CAGCTACCTGGGCCAGGTCACCGA---GGTCAAGCTGCCGACCTTGACCCGCAAGATGGA 17155
||||||| ||||| ||| || |||| ||||| | ||||||||||| | ||
Sbjct 7954 CAGCTACATGGGC---GTCGTTGAATCCGTCACCCTGCCAAAGCTGACCCGCAAGCTTGA 8010
Query 17156 GGAATACCGCGCCGGCGGCATGCTCGGTCCC---ATCGATATTGACCTCGGCCAAGAGAA 17212
| ||||||||| |||||| |||| ||| | | ||| ||||||||||| | || |
Sbjct 8011 GAAATACCGCGGCGGCGGGATGC-CGGGCTCGGTGTCG--ATTGACCTCGGTCTCGACGA 8067
Query 17213 AATCGAACTG------GAATGGAAGTGTGGCGGACTGATGCGCGACGTGCTGCG---CCA 17263
|| ||| || |||| | ||||| ||| || || |||| | ||
Sbjct 8068 CGACGCGCTGTCGCTTGAGTGGACGCTGGGCGGCCTGCCTGACGTCGAGCTGTGGGCGCA 8127
Query 17264 GTACGGCGCCATC----GCCCACAACGCCGTGCAGCTGCGATTCGCTGGCGCCTATCAGC 17319
|||| ||| || | ||| ||| ||||| |||||| ||| | ||| | | ||||
Sbjct 8128 GTAC-GCGTCACCGGGTGCCGACA---GCGTGCCGCTGCGCTTCACCGGCTCTTTCCAGC 8183
Query 17320 GCGAAGACAGCGCAGACGTGGACTCGGTCGAGATCGTCATCCGCGGCCGTCACAGCGAGA 17379
|||| |||| || | | | | || ||| | ||||| || |||||||||| |||
Sbjct 8184 GCGACGACACCGGCGCTATTTCCGCCGTTGAGGTGGTCATGCGTGGCCGTCACAAGGAGT 8243
Query 17380 TCGACGCCGGC 17390
||||| ||||
Sbjct 8244 ACGACGGCGGC 8254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107156117124236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |