Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq197 118 1e-21
seq1030 82.4 7e-11
>seq197
Length=620651
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|||||||| | ||||||||| | ||| | ||||||||||| || |||||||| ||| |
Sbjct 447162 CCTCCTCGCAGACGCAAAACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAC 447221
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| |||||| || || || || ||| |||||| | ||||| || || ||
Sbjct 447222 AAGGTGCGGCCGTCTTCAAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 447281
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || |||||||| || || ||| | | || | ||||||| | ||| |||
Sbjct 447282 ATTCCCTCTTTGTCTTGGATCTTGGCTTTGACATTCTCGATGGTGTCTGAAGCTTCAACT 447341
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | |||||||| |||| ||||| ||||| || ||||||
Sbjct 447342 TCCAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCATA 447389
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | |||||| || || |||| || || ||||| || || || || || |
Sbjct 446706 CCACCACGCAGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGAC 446765
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||| | |||||| ||||||||||| || |||| || || ||||| ||||||||
Sbjct 446766 AATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGG 446825
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||| ||||| || || || | | || | ||||||| | ||| |||
Sbjct 446826 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACT 446885
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | |||||||| || | ||||| ||||| || ||||||
Sbjct 446886 TCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCATA 446933
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| || | ||||||||| | ||| | ||||| || || || |||||||| ||| |
Sbjct 447650 CCTCCGCGCAGACGCAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 447709
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| || || || ||||||||||| |||| ||||| || || ||||||||
Sbjct 447710 AAGGTGCGACCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGG 447769
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| || ||||| || || || | | || | ||||||| | ||| |||
Sbjct 447770 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACT 447829
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415
|| | || | ||||| || |||| ||||| ||||| || |||||| ||
Sbjct 447830 TCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATCTGCATACCT 447880
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | |||||| || || |||| || || ||||| || || || || || |
Sbjct 448863 CCACCACGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGAC 448922
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||| | |||||| ||||||||||| || |||| || || ||||| ||||||||
Sbjct 448923 AATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGG 448982
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||| ||||| || || || | | || | ||||||| | ||| |||
Sbjct 448983 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACT 449042
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | |||||||| || | ||||| ||||| || ||||||
Sbjct 449043 TCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCATA 449090
>seq1030
Length=27445
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||||| | | ||| || || |||| |||||||| || || |||||||| ||| |
Sbjct 2674 CCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 2733
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | || || || ||||||||||| ||||||| || ||||| || || ||
Sbjct 2734 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGG 2793
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || || ||||| || || ||| | | ||| | ||||| | | || ||
Sbjct 2794 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACC 2853
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| || | |||||||| || | || || ||||| || ||||||
Sbjct 2854 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATA 2901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488533044400800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |