Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq962 277 3e-69
>seq962
Length=32987
Score = 277 bits (306), Expect = 3e-69
Identities = 765/1155 (66%), Gaps = 21/1155 (2%)
Strand=Plus/Plus
Query 27885 TTCATGCATACCGATGTAACCGATACTAACAGATGCGCGACCGTTGTCAAATGCTTTCAT 27944
|||||| || ||||| || || | || || ||||| ||||| | || | | |||
Sbjct 24595 TTCATGGATGCCGATATAGCCCAGCGAAATCGACGCGCGGCCGTTTTTGAA-GATCTCAG 24653
Query 27945 -GATATCGTCATCTGGGTTCAGACGAACACCACAAGCACCTTCAACGTAAAGAATCGGAG 28003
|| || || || | ||||| || || || || || ||||| | || || || || |
Sbjct 24654 AGACGTCATCGTCCGCTTTCAGGCGCACGCCGCAGGCCCCTTCCATATAGAGGATAGGCG 24713
Query 28004 CGACGCTGGCTTTAACGCCACGCAGACGATCAACGCGAGCCATCAAAGC-TTGCTTGGTG 28062
| |||| |||||| || || || || | | || | ||||| || |||| |
Sbjct 24714 CCACGCGGGCTTTTACCCCTTCAAGGCGGGCGATACGGGTCATCAGCGCCTTGCGCGCC- 24772
Query 28063 ATTTCCATACGTTCTTCCAGAAGATCCCAGAAAC--GCATAGGATTGCCATTTGAATCAA 28120
| | || ||||| ||||| || |||||| || | |||||| || | || |
Sbjct 24773 AGCTGCAGGCGTTCATCCAGCAGTGTCCAGAATTCAGCTTC--ATTGCCTTTGGCCTCCA 24830
Query 28121 GAGCGATTCGCGGCAAGTTCAGAGTGACCACACCCAAGTTGTTACGGCCTTCATGAACTT 28180
| ||||| ||||||| |||||| ||| || || | ||||||||| || || || | |
Sbjct 24831 GCGCGATGCGCGGCAGGTTCAGGCTGATGACGCCGAGGTTGTTACGCCCGTCGTGGATCT 24890
Query 28181 CAACACCGTTTTCGTCTTCCCAG-CGATGCAAGAAACTACGGCATCCCATTGGGAATTTG 28239
| |||||||| ||||| | || | | ||| || ||||| |||||||| |||
Sbjct 24891 GCTCGCCGTTTTCATCTTCGTATACGCCG-AGGAAGCTGCGGCAACCCATTGGCGTTTTA 24949
Query 28240 AAACTACCAGTCACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACGTTTC 28299
|| || || |||| |||| || ||| ||| ||||||| ||||| ||||| || ||
Sbjct 24950 AATGACCCGGTTACTTTTACGACCTGATCGTAGTTCAGAATATCCGGGTACATGCGCTTG 25009
Query 28300 GCAGCGCATTCCAGAGCCAACTGTTTGATACGATACAGCGGATCAGTCGGGTTCAAGTTG 28359
||||| ||||| |||| ||||||||| || |||||| || |||
Sbjct 25010 CTCGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAATTCGGATCGCCAACTTTGTGGTTC 25069
Query 28360 TGTCCGTCTTTCAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTTACCA 28419
| ||||| | |||||||||||||||||||| || | || | | | |||||
Sbjct 25070 AGCCCGTCGCGGATGGCGAATACCAGTTTCGGGAACACCGCCGTTTTGCGGTTCTTACCG 25129
Query 28420 AGACCAGCCAAACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTCCCAGCTAGTA 28479
|| || | | ||| |||||| | | || |||| || |||||||| ||
Sbjct 25130 AGGCCGGAGATACGGTTGCGCAGGATGGACTGCTGGATCAAACGCGATTCCCAGCTGGTG 25189
Query 28480 CCAAGACCAAAGCCGAAGGT-ACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGTGTT 28538
|| || ||||| |||||||| ||| ||||| || || || || |||| ||||| || ||
Sbjct 25190 CCCAGGCCAAAACCGAAGGTCACA-AACGGCGTCTGGCCGTTGGCGGTATGCAGGGTATT 25248
Query 28539 GACCTCATACTCCAGACCTTGCATAGCATCATATACAGCTTTGCGAGTCTTTGCAATAGC 28598
|||||||||||||| || | || ||||| |||| ||| || | ||
Sbjct 25249 CACCTCATACTCCAGCGACTGGAACGCGTCATAGCACTCTTTCTCAGTGC--GCGAGTGC 25306
Query 28599 ATATTGCTGTTGA--TCTGGAATTTTCCAGTAA-CGAGCTTCATCCAAGTGCTTTTCGTG 28655
|| || || | || || || | ||| | || | | | | |||||| | |
Sbjct 25307 GCATAGCCGTCGGCGTCCGGGATCTGCCACTCTTCGGCCGTTTTGCG-GTGCTTGTTGAA 25365
Query 28656 TGTCATTTTAACATACGGTGCCAGCACTTCGTCAATGCGATTGATTGTGTTACCGCCATA 28715
| | ||| |||| |||||||||||||||||||| || || ||| | ||||| ||
Sbjct 25366 GCTTGCGGTCACAAACGGGGCCAGCACTTCGTCAATGCGGTTAATGGTGGTGCCGCCGTA 25425
Query 28716 AATGTGACTTGCTACTTGAGCGATGATTTGAGCAATCACGGCAGCAGCGGTAGAAATGCT 28775
|||||| || || || || ||||| || || || | || |||| ||||| || |||
Sbjct 25426 AATGTGGCTGGCGACCTGGGCGATAATCTGTGCCGTGACCGCAGTGGCGGTGGAGATGGA 25485
Query 28776 TTTCGGAGTCTCGATTTGAGCATTACCCATTCTGAAACCACGTTTCAACATTCCTTCAAC 28835
||| || | || || | || ||||||||| | || || | ||| ||| |||| |
Sbjct 25486 TTTTGGCGGTTCAATCTCGGCGTTACCCATTTTAAACCCGTGGGTCAGCATGCCTTTCAG 25545
Query 28836 ATCTATCAACATGCAGTTAAACATTGGGAAGAACGGTGAATAATCAAGATCGTGGAAGTG 28895
|| |||| ||| ||||| ||||| ||||||||||||||||| || |||||||| ||||
Sbjct 25546 GTCAATCAGCATACAGTTGAACATCGGGAAGAACGGTGAATAGTCGAGATCGTGATAGTG 25605
Query 28896 AATCCAACCATTTTCGTGTGCTTGCATAACTTCAACAGGCAGATAATGCT---TGGCGAA 28952
||| ||| ||||| ||| | || || ||||| |||| ||| |
Sbjct 25606 GATCTCACCGCGCTCGTGCGCTGAGACCACATCGCGCGGCAGCAGGTGCTGACGGGCATA 25665
Query 28953 ATGCTTACTAACGATACCAGCTACCAAATCGCGTTGAGTTGGAATTACCTTGGCGTCTTT 29012
|| || |||||||| || | || |||||| || || || || || || ||||||
Sbjct 25666 GTGTTTGGCGACGATACCGGCCAGCAGATCGCGCTGGGTGGGGATCACTTTACTGTCTTT 25725
Query 29013 GTTTGCATTTTCATT 29027
||| || ||||||||
Sbjct 25726 GTTGGCGTTTTCATT 25740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710275271719840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |