Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq651 120 1e-21
seq955 84.2 7e-11
seq952 84.2 7e-11
>seq651
Length=115633
Score = 120 bits (132), Expect = 1e-21
Identities = 283/423 (67%), Gaps = 6/423 (1%)
Strand=Plus/Plus
Query 188779 GGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTA 188838
||||| || ||||| |||||||| | | ||| |||| |||| | || | ||||
Sbjct 80520 GGCCCAACCGGTTCCGGTAAAACGCTGCTGGCTGAAACCCTGGCGCGTCTGCTTGATGTT 80579
Query 188839 CCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTG 188898
|| | | || | ||||| || | | || ||||| ||||| || ||||| || ||
Sbjct 80580 CCGTTCACCATGGCGGATGCCACCACCCTGACCGAAGCCGGTTACGTGGGTGAGGACGTC 80639
Query 188899 GAAAACGTATTGCTTCGTTTAATCCAAGCAGCT-GATTACGA--TATCGAATTAGCGGAA 188955
|||||| | | | | | || | || |||||||| || ||| ||| |
Sbjct 80640 GAAAACATCATCCAGAAACTGCTGCA-GAAGTGCGATTACGACGTACAGAA--AGCCCAG 80696
Query 188956 CGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCC 189015
|| || ||||| || |||||||| | || || || | | ||||| || | | | |||
Sbjct 80697 CGCGGGATTGTTTACATCGATGAGATCGACAAGATCTCCCGTAAATCCGACAACCCGTCC 80756
Query 189016 ATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGT 189075
|| || || || ||||| || ||||| |||||||| || | | || | || ||||||
Sbjct 80757 ATCACTCGTGACGTATCGGGTGAAGGCGTACAGCAGGCACTGCTGAAGCTGATCGAAGGT 80816
Query 189076 ACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAA 189135
|| ||||| ||||| || || |||||||||||||| || || || || | || |
Sbjct 80817 ACGGTTGCCGCCGTTCCGCCACAGGGTGGTCGTAAACATCCGCAGCAGGAGTTCCTGCAG 80876
Query 189136 ATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATT 189195
| ||||| | || ||| |||| || ||| || || |||| |||||| || || ||
Sbjct 80877 GTTGATACCTCCAAGATCCTGTTCATCTGTGGCGGTGCCTTTGCTGGTCTGGATAAAGTT 80936
Query 189196 ATC 189198
|||
Sbjct 80937 ATC 80939
>seq955
Length=33606
Score = 84.2 bits (92), Expect = 7e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 403939 GTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTCG 403998
||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 1506 GTGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCG 1447
Query 403999 AATCCTACCAGGCG 404012
|||||||| ||||
Sbjct 1446 AATCCTACAGGGCG 1433
>seq952
Length=33737
Score = 84.2 bits (92), Expect = 7e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 403939 GTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTCG 403998
||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 12145 GTGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCG 12086
Query 403999 AATCCTACCAGGCG 404012
|||||||| ||||
Sbjct 12085 AATCCTACAGGGCG 12072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591873808944512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |