Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq190 82.4 8e-11 >seq190 Length=632835 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 22098 TCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGACAAGATGCACG 22157 ||||| | ||||| ||||| || || | || || |||||||| | |||||||| ||| Sbjct 370260 TCTTCTTGGGACCGACATACTATCAACGTCTGAAGCATATGGTGGACGACAAGATCCACT 370319 Query 22158 CCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTCAGG 22217 | || ||| || | ||| || || ||||||| | | |||| | |||| Sbjct 370320 CTCGTGCCCGAGGGCCTGTGCAGATCCTGGTGAGGCAGCCCATG-GAGGGCAGGGCCAGG 370378 Query 22218 G-CGGCGGGCTGCGGTTCGGAGAGATGGAGAAGGACTGCATTCTGGTGCACGGGGCAACA 22276 | ||| |||||||||||||| ||||||||| ||||| | | ||||||||| | Sbjct 370379 GACGGAGGGCTGCGGTTCGGTGAGATGGAGCGCGACTGTCAGATCGCGCACGGGGCGGCG 370438 Query 22277 CAGTTCTTGAACGAACGCATGTTC 22300 |||||| || ||| ||| ||||| Sbjct 370439 CAGTTCCTGCGCGAGCGCCTGTTC 370462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521533904339920