Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_024121.1
Length=167266
Score E
Sequences producing significant alignments: (Bits) Value
seq974 161 1e-34
>seq974
Length=31311
Score = 161 bits (178), Expect = 1e-34
Identities = 278/401 (69%), Gaps = 12/401 (3%)
Strand=Plus/Plus
Query 139761 TCAACGCCTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGA 139820
||||| || |||||||||||| || |||| | |||| ||||||| |||||| || ||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 139821 TAGTACAACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTC 139880
||| ||| ||||| ||||| || || || || || ||||| |||||||| ||||| |||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120
Query 139881 TGGAAGTGTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTT 139940
|||||||| || |||| || || ||| ||||| |||||||| | |||
Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGG 180
Query 139941 GAGCCTTCAGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTAC 140000
||| || ||||| ||||| |||||||||||||| || || || | |||| |||
Sbjct 181 CTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTAT 240
Query 140001 TTGACAATCGATGCT-GCTGAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAAC 140059
|| || || | ||| | | | ||||||| | || ||| || ||||||| |
Sbjct 241 TTCACGAT-GGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAG 299
Query 140060 AACACACGAACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAA 140119
|| || || ||||| ||||| | || || || | || | ||| || || || ||||
Sbjct 300 TACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAG 359
Query 140120 TGAAACGCGCTTTTGA-----GATACTGCATCATAGAAACG 140155
|||| | |||| ||||| ||||| ||||||||
Sbjct 360 AGAAA-----TCTTGAACGTCGATACCGCATCGTAGAAACG 395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535111199862240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |