Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq974 161 1e-34 >seq974 Length=31311 Score = 161 bits (178), Expect = 1e-34 Identities = 278/401 (69%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 139761 TCAACGCCTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGA 139820 ||||| || |||||||||||| || |||| | |||| ||||||| |||||| || || Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 139821 TAGTACAACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTC 139880 ||| ||| ||||| ||||| || || || || || ||||| |||||||| ||||| ||| Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 139881 TGGAAGTGTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTT 139940 |||||||| || |||| || || ||| ||||| |||||||| | ||| Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGG 180 Query 139941 GAGCCTTCAGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTAC 140000 ||| || ||||| ||||| |||||||||||||| || || || | |||| ||| Sbjct 181 CTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTAT 240 Query 140001 TTGACAATCGATGCT-GCTGAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAAC 140059 || || || | ||| | | | ||||||| | || ||| || ||||||| | Sbjct 241 TTCACGAT-GGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAG 299 Query 140060 AACACACGAACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAA 140119 || || || ||||| ||||| | || || || | || | ||| || || || |||| Sbjct 300 TACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAG 359 Query 140120 TGAAACGCGCTTTTGA-----GATACTGCATCATAGAAACG 140155 |||| | |||| ||||| ||||| |||||||| Sbjct 360 AGAAA-----TCTTGAACGTCGATACCGCATCGTAGAAACG 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535111199862240