Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_024139.1
Length=108483
Score E
Sequences producing significant alignments: (Bits) Value
seq637 159 2e-34
seq236 93.3 3e-14
>seq637
Length=122170
Score = 159 bits (176), Expect = 2e-34
Identities = 147/186 (79%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 27341 TTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGC 27400
|||||| | |||||| || ||||| | |||||||| | ||| ||||| |||||| |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 27401 ATTAAATCGAACAGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATG 27460
||||| || || ||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 27461 TTTCTGCGCATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACC 27520
|| | |||||| | ||| |||||| | | || || || || ||||||||||||||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 27521 TTCGAT 27526
||||||
Sbjct 107286 TTCGAT 107291
>seq236
Length=545527
Score = 93.3 bits (102), Expect = 3e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 27353 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAAC 27412
|||||| ||||| ||||||||| ||| ||||| | ||||| | || || || ||
Sbjct 30883 AGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCGTAC 30824
Query 27413 AGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC 27472
|| || ||||| || || ||||||| ||| || |||||||| || || | ||| ||
Sbjct 30823 CGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGCGTC 30764
Query 27473 CAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACCTTC 27523
|| ||| || |||| | || || || || |||||||||||||||||
Sbjct 30763 CATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTC 30713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347013212607096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |